Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04035

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
918,446	-		BPHYT_RS04030	0.49	-1.4
918,458	-		BPHYT_RS04030	0.49	+0.9
918,463	+		BPHYT_RS04030	0.50	-0.4
920,322	+		BPHYT_RS04035	0.73	-1.2
920,323	-		BPHYT_RS04035	0.73	-1.7
920,329	-		BPHYT_RS04035	0.73	-0.5
920,329	-		BPHYT_RS04035	0.73	-0.5
921,252	-		BPHYT_RS04040	0.39	+0.2
921,281	-		BPHYT_RS04040	0.41	-2.2
921,385	+		BPHYT_RS04040	0.48	+0.2
921,468	+		BPHYT_RS04040	0.54	+0.4