Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03485

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
785,415	+				-0.1
785,658	-				-0.5
785,788	+		BPHYT_RS03480	0.22	+0.2
785,788	+		BPHYT_RS03480	0.22	+0.2
785,788	+		BPHYT_RS03480	0.22	-0.4
785,788	+		BPHYT_RS03480	0.22	+0.2
785,789	-		BPHYT_RS03480	0.22	+0.6
785,789	-		BPHYT_RS03480	0.22	-0.4
785,876	-		BPHYT_RS03480	0.39	+0.7
786,175	+				-3.3
786,175	+				-1.0
786,176	-				-0.6
786,179	+				+0.4
786,244	-				-0.4
786,244	-				-1.1
786,355	-				-2.0
787,240	-				+0.1
788,174	+				-3.3
788,174	+				+0.0
788,211	-				+0.7
788,211	-				-0.7