Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23770

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
4,961,061	-		BWI76_RS23760	0.20	-0.9
4,961,138	+				+1.8
4,961,372	-		BWI76_RS23765	0.24	-2.6
4,961,383	+		BWI76_RS23765	0.25	+1.6
4,961,598	+		BWI76_RS23765	0.55	-0.4
4,961,710	-		BWI76_RS23765	0.70	-0.6
4,961,782	-		BWI76_RS23765	0.80	-1.3
4,961,822	-		BWI76_RS23765	0.86	+2.0
4,961,929	-				-0.3
4,961,931	+				+0.9
4,961,949	+				+0.8
4,961,983	-				+1.3
4,961,995	-				-1.6
4,962,020	-				-1.6
4,962,071	+				-1.6
4,962,076	+				-0.4
4,962,076	+				-0.4
4,962,076	+				-4.5
4,962,079	-				+0.1
4,962,153	+		BWI76_RS23770	0.15	+3.3
4,962,157	-		BWI76_RS23770	0.16	-1.3
4,962,171	-		BWI76_RS23770	0.17	-0.2
4,962,188	-		BWI76_RS23770	0.19	-1.4
4,962,202	+		BWI76_RS23770	0.21	+0.3
4,962,227	-		BWI76_RS23770	0.24	+3.5
4,962,229	+		BWI76_RS23770	0.24	+3.3
4,962,230	+		BWI76_RS23770	0.24	+1.3
4,962,232	-		BWI76_RS23770	0.24	+0.9
4,962,237	-		BWI76_RS23770	0.25	+0.8
4,962,237	-		BWI76_RS23770	0.25	-0.2
4,962,277	-		BWI76_RS23770	0.29	-1.8
4,962,277	-		BWI76_RS23770	0.29	-0.8
4,962,305	-		BWI76_RS23770	0.32	-2.1
4,962,344	-		BWI76_RS23770	0.37	+1.2
4,962,377	-		BWI76_RS23770	0.40	-0.4
4,962,381	-		BWI76_RS23770	0.41	-0.5
4,962,412	+		BWI76_RS23770	0.44	+0.4
4,962,422	+		BWI76_RS23770	0.45	+0.2
4,962,422	+		BWI76_RS23770	0.45	+0.8
4,962,429	-		BWI76_RS23770	0.46	+0.9
4,962,429	-		BWI76_RS23770	0.46	+1.4
4,962,431	+		BWI76_RS23770	0.46	-0.4
4,962,431	+		BWI76_RS23770	0.46	+0.8
4,962,431	+		BWI76_RS23770	0.46	-1.1
4,962,431	+		BWI76_RS23770	0.46	+0.3
4,962,431	+		BWI76_RS23770	0.46	+1.5
4,962,439	-		BWI76_RS23770	0.47	+1.0
4,962,439	-		BWI76_RS23770	0.47	-0.6
4,962,439	-		BWI76_RS23770	0.47	-0.6
4,962,439	-		BWI76_RS23770	0.47	-2.4
4,962,439	-		BWI76_RS23770	0.47	-0.7
4,962,439	-		BWI76_RS23770	0.47	+2.1
4,962,439	-		BWI76_RS23770	0.47	-0.9
4,962,439	-		BWI76_RS23770	0.47	-1.9
4,962,439	-		BWI76_RS23770	0.47	-1.6
4,962,439	-		BWI76_RS23770	0.47	-1.6
4,962,439	-		BWI76_RS23770	0.47	-2.1
4,962,439	-		BWI76_RS23770	0.47	+0.9
4,962,454	+		BWI76_RS23770	0.49	-0.2
4,962,454	+		BWI76_RS23770	0.49	+0.1
4,962,454	-		BWI76_RS23770	0.49	-2.3
4,962,455	-		BWI76_RS23770	0.49	-1.9
4,962,463	+		BWI76_RS23770	0.50	+1.9
4,962,463	+		BWI76_RS23770	0.50	-0.5
4,962,465	-		BWI76_RS23770	0.50	+0.6
4,962,471	-		BWI76_RS23770	0.51	-0.6
4,962,476	+		BWI76_RS23770	0.51	+0.6
4,962,476	+		BWI76_RS23770	0.51	-0.5
4,962,476	+		BWI76_RS23770	0.51	-1.4
4,962,476	+		BWI76_RS23770	0.51	-0.6
4,962,476	+		BWI76_RS23770	0.51	-0.5
4,962,476	+		BWI76_RS23770	0.51	+1.7
4,962,477	+		BWI76_RS23770	0.52	+0.0
4,962,477	+		BWI76_RS23770	0.52	+0.8
4,962,478	+		BWI76_RS23770	0.52	+1.9
4,962,484	-		BWI76_RS23770	0.52	+0.5
4,962,484	-		BWI76_RS23770	0.52	+1.5
4,962,484	-		BWI76_RS23770	0.52	-0.8
4,962,484	-		BWI76_RS23770	0.52	+0.8
4,962,485	-		BWI76_RS23770	0.52	-1.4
4,962,498	+		BWI76_RS23770	0.54	-0.6
4,962,506	-		BWI76_RS23770	0.55	+0.1
4,962,513	+		BWI76_RS23770	0.56	-1.8
4,962,513	-		BWI76_RS23770	0.56	+0.8
4,962,532	-		BWI76_RS23770	0.58	-0.1
4,962,532	-		BWI76_RS23770	0.58	+0.4
4,962,570	-				-0.1
4,962,571	+		BWI76_RS23770	0.62	-1.4
4,962,585	+		BWI76_RS23770	0.64	-0.1
4,962,585	-		BWI76_RS23770	0.64	+0.5
4,962,625	-		BWI76_RS23770	0.68	-2.8
4,962,625	-		BWI76_RS23770	0.68	-1.6
4,962,626	-		BWI76_RS23770	0.68	+0.9
4,962,638	-		BWI76_RS23770	0.69	-0.1
4,962,640	+		BWI76_RS23770	0.70	+0.9
4,962,677	+		BWI76_RS23770	0.74	+0.9
4,962,683	+		BWI76_RS23770	0.74	-0.8
4,962,683	+		BWI76_RS23770	0.74	-0.6
4,962,692	+		BWI76_RS23770	0.75	+0.1
4,962,701	-		BWI76_RS23770	0.76	+0.8
4,962,718	-		BWI76_RS23770	0.78	-2.1
4,962,743	+		BWI76_RS23770	0.81	-0.6
4,962,751	-		BWI76_RS23770	0.82	-0.1
4,962,751	-		BWI76_RS23770	0.82	+0.5
4,962,788	+		BWI76_RS23770	0.86	+0.4
4,962,788	+		BWI76_RS23770	0.86	+0.9
4,962,822	+				+0.5
4,962,834	+				+0.1
4,962,834	+				-2.2
4,962,834	+				-1.4
4,962,834	+				+1.8
4,962,834	+				+0.6
4,962,834	+				-0.9
4,962,836	+				-1.3
4,962,842	-				+0.8
4,962,842	-				-1.2
4,962,842	-				-0.1
4,962,842	-				-0.1
4,962,858	+				-0.3
4,962,859	+				+0.8
4,962,862	-				+0.2
4,962,867	+				+0.1
4,962,868	+				+0.9
4,962,908	-				-0.3
4,962,926	+				+0.4
4,962,926	+				-2.6
4,962,942	+				-0.9
4,962,948	+				-1.9
4,962,948	+				-1.4
4,962,950	-				+1.1
4,962,950	-				+1.6
4,963,045	-				-1.3
4,963,058	-				+0.9
4,963,084	+				-1.9
4,963,096	+				-0.1
4,963,104	-				-0.6
4,963,117	+				-0.5
4,963,118	+				+0.6
4,963,118	+				+0.9
4,963,126	-				-2.4
4,963,126	-				-2.5
4,963,129	+				-0.1
4,963,129	-				-0.3
4,963,137	-				-2.6
4,963,166	+				+0.5
4,963,168	-				-1.1
4,963,174	-				-3.6
4,963,174	-				+0.3
4,963,174	-				-2.1
4,963,189	+				+0.9
4,963,189	+				-0.1
4,963,197	-				-0.1
4,963,197	-				+0.9
4,963,204	-				+0.6
4,963,388	-		BWI76_RS23775	0.17	-0.7
4,963,446	+		BWI76_RS23775	0.21	+1.6
4,963,480	-				+2.9
4,963,540	+		BWI76_RS23775	0.28	+1.8
4,963,606	+		BWI76_RS23775	0.32	-1.3
4,963,614	-		BWI76_RS23775	0.33	+0.2
4,963,877	+		BWI76_RS23775	0.50	+0.4
4,963,881	+		BWI76_RS23775	0.50	+0.7
4,963,891	+		BWI76_RS23775	0.51	-1.1
4,963,899	-		BWI76_RS23775	0.52	+0.6