Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21515

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21500 and BWI76_RS21505 are separated by 54 nucleotidesBWI76_RS21505 and BWI76_RS21510 are separated by 120 nucleotidesBWI76_RS21510 and BWI76_RS21515 are separated by 39 nucleotidesBWI76_RS21515 and BWI76_RS21520 are separated by 46 nucleotidesBWI76_RS21520 and BWI76_RS21525 are separated by 18 nucleotides BWI76_RS21500: BWI76_RS21500 - membrane protein, at 4,503,460 to 4,504,830 _RS21500 BWI76_RS21505: BWI76_RS21505 - hypothetical protein, at 4,504,885 to 4,505,322 _RS21505 BWI76_RS21510: BWI76_RS21510 - 50S ribosomal protein L19, at 4,505,443 to 4,505,790 _RS21510 BWI76_RS21515: BWI76_RS21515 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 4,505,830 to 4,506,597 _RS21515 BWI76_RS21520: BWI76_RS21520 - ribosome maturation factor RimM, at 4,506,644 to 4,507,192 _RS21520 BWI76_RS21525: BWI76_RS21525 - 30S ribosomal protein S16, at 4,507,211 to 4,507,459 _RS21525 Position (kb) 4505 4506 4507Strain fitness (log2 ratio) -1 0 1at 4504.940 kb on - strand, within BWI76_RS21505at 4507.568 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
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4,504,940 - BWI76_RS21505 0.13 -0.5
4,507,568 + -0.0

Or see this region's nucleotide sequence