Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17250

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
3,573,187	-		BWI76_RS17245	0.21	+0.3
3,573,261	+		BWI76_RS17245	0.33	-1.6
3,573,281	+		BWI76_RS17245	0.36	-2.0
3,573,404	-		BWI76_RS17245	0.55	+1.3
3,573,478	+		BWI76_RS17245	0.66	-3.4
3,573,496	-		BWI76_RS17245	0.69	+0.1
3,573,526	+		BWI76_RS17245	0.73	-0.3
3,573,526	+		BWI76_RS17245	0.73	+1.4
3,573,526	+		BWI76_RS17245	0.73	-1.5
3,573,534	-		BWI76_RS17245	0.75	-0.4
3,573,534	-		BWI76_RS17245	0.75	+0.4
3,573,545	-		BWI76_RS17245	0.76	-0.0
3,573,546	-		BWI76_RS17245	0.77	+3.2
3,573,582	+		BWI76_RS17245	0.82	-2.3
3,573,583	+		BWI76_RS17245	0.82	+0.2
3,573,613	+		BWI76_RS17245	0.87	+0.1
3,573,621	-		BWI76_RS17245	0.88	-1.2
3,573,627	+		BWI76_RS17245	0.89	+0.8
3,573,627	+		BWI76_RS17245	0.89	+0.1
3,573,635	-				+1.2
3,573,635	-				-0.5
3,573,635	-				-0.9
3,573,699	-				+0.1
3,573,806	+				-2.5
3,573,831	-				-1.3
3,573,874	-				+1.1
3,573,886	-				-0.5
3,573,914	+				-1.5
3,573,921	+				-1.8
3,573,977	-				-0.9
3,573,987	-				-0.9
3,573,992	-				+0.2
3,574,009	-				+0.5
3,574,009	-				+0.5
3,574,009	-				-0.3
3,574,109	-				-0.2
3,574,179	-				-1.2
3,574,209	+				+1.1
3,574,217	-				+0.8
3,574,217	-				-2.8
3,574,338	+				-0.3
3,574,513	+		BWI76_RS17250	0.13	-2.0
3,574,787	-		BWI76_RS17250	0.23	+1.0
3,575,017	-		BWI76_RS17250	0.31	-1.4
3,575,278	+		BWI76_RS17250	0.41	+0.2
3,575,456	-		BWI76_RS17250	0.48	-1.0
3,575,744	-				-0.8
3,575,891	-		BWI76_RS17250	0.64	-0.1
3,576,126	+		BWI76_RS17250	0.73	-2.6
3,576,208	+		BWI76_RS17250	0.76	+1.4
3,576,279	+		BWI76_RS17250	0.79	-1.1
3,576,284	+		BWI76_RS17250	0.79	+0.2
3,576,711	-				-0.6
3,576,797	-				-2.4
3,576,815	+				+0.2
3,576,823	-				+0.8
3,577,054	-				-0.7
3,577,203	-		BWI76_RS17255	0.28	-1.2
3,577,203	-		BWI76_RS17255	0.28	-1.5
3,577,301	-		BWI76_RS17255	0.44	-0.0
3,577,313	-		BWI76_RS17255	0.46	-1.0
3,577,338	+		BWI76_RS17255	0.50	-0.8
3,577,338	+				+0.8
3,577,338	+		BWI76_RS17255	0.50	-2.2
3,577,338	+		BWI76_RS17255	0.50	-1.2
3,577,339	+		BWI76_RS17255	0.50	-1.8
3,577,346	-		BWI76_RS17255	0.51	-0.2
3,577,346	-		BWI76_RS17255	0.51	-0.2
3,577,365	-		BWI76_RS17255	0.55	-1.2
3,577,368	-		BWI76_RS17255	0.55	-1.1
3,577,376	-		BWI76_RS17255	0.56	-0.6
3,577,382	+		BWI76_RS17255	0.57	+0.9
3,577,421	-		BWI76_RS17255	0.64	-0.2
3,577,421	-		BWI76_RS17255	0.64	+0.7
3,577,423	-		BWI76_RS17255	0.64	+0.2
3,577,425	+		BWI76_RS17255	0.64	-2.0
3,577,433	-		BWI76_RS17255	0.66	-0.5
3,577,463	-		BWI76_RS17255	0.70	-0.2
3,577,473	+		BWI76_RS17255	0.72	+0.8
3,577,481	-		BWI76_RS17255	0.73	-0.1
3,577,536	+		BWI76_RS17255	0.82	-0.0
3,577,536	+		BWI76_RS17255	0.82	-0.8
3,577,536	+		BWI76_RS17255	0.82	-2.2
3,577,536	+		BWI76_RS17255	0.82	-1.2
3,577,544	-		BWI76_RS17255	0.83	-0.3
3,577,544	-		BWI76_RS17255	0.83	-1.5
3,577,544	-		BWI76_RS17255	0.83	-1.8
3,577,544	-		BWI76_RS17255	0.83	-0.2
3,577,544	-		BWI76_RS17255	0.83	-0.6
3,577,544	-		BWI76_RS17255	0.83	-2.4
3,577,544	-		BWI76_RS17255	0.83	-1.5
3,577,544	-		BWI76_RS17255	0.83	-1.1
3,577,544	-		BWI76_RS17255	0.83	-2.0
3,577,544	-		BWI76_RS17255	0.83	+0.8
3,577,544	-		BWI76_RS17255	0.83	-1.9
3,577,544	-		BWI76_RS17255	0.83	-1.3
3,577,589	-				-0.7
3,577,593	+				-0.2
3,577,599	-				-1.1
3,577,602	-				-0.8
3,577,623	-				-0.4
3,577,659	-				-1.7
3,577,723	+				-0.7
3,577,728	+				-0.6
3,577,729	-				+1.7
3,577,740	-				-2.7
3,577,757	-				-3.4
3,577,759	-				+0.8
3,577,759	-				-2.0
3,577,773	-				-1.1
3,577,797	+				-0.2
3,577,802	-				-0.0
3,577,805	-				-1.5
3,577,816	-				-4.1
3,577,825	+		BWI76_RS17260	0.11	+0.8
3,577,840	-		BWI76_RS17260	0.16	-0.5
3,577,848	-		BWI76_RS17260	0.18	-2.6
3,577,848	-		BWI76_RS17260	0.18	-1.2