Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15105

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
3,163,659	+		BWI76_RS15100	0.52	-0.7
3,163,667	-		BWI76_RS15100	0.53	-1.3
3,163,702	+		BWI76_RS15100	0.55	+1.2
3,163,986	-		BWI76_RS15100	0.69	-0.0
3,163,998	+		BWI76_RS15100	0.70	+1.3
3,164,036	-		BWI76_RS15100	0.72	+0.9
3,164,046	-		BWI76_RS15100	0.72	-0.6
3,164,058	-		BWI76_RS15100	0.73	+0.7
3,164,086	+		BWI76_RS15100	0.74	+1.8
3,164,086	+				-1.0
3,164,094	-		BWI76_RS15100	0.75	-1.0
3,164,256	+		BWI76_RS15100	0.83	+1.4
3,164,332	-		BWI76_RS15100	0.87	-0.0
3,164,356	-		BWI76_RS15100	0.88	+0.7
3,164,356	-		BWI76_RS15100	0.88	+1.0
3,164,373	-		BWI76_RS15100	0.89	-1.3
3,164,390	-		BWI76_RS15100	0.90	-0.2
3,164,392	+		BWI76_RS15100	0.90	-0.1
3,164,392	+		BWI76_RS15100	0.90	+2.0
3,164,392	+		BWI76_RS15100	0.90	+1.2
3,164,392	+		BWI76_RS15100	0.90	+0.8
3,164,400	-				-1.3
3,164,400	-				-0.8
3,164,400	-				+1.8
3,164,400	-				+1.0
3,164,400	-				+1.0
3,164,402	+				+1.5
3,164,410	-				-0.3
3,164,426	+				+1.8
3,164,530	+				+1.3
3,164,535	+				-2.0
3,164,557	+				-1.6
3,164,563	+				+1.7
3,164,563	+				+0.4
3,164,565	-				-1.4
3,164,565	-				-2.0
3,164,571	-				-0.6
3,164,571	-				-0.6
3,164,571	-				-1.0
3,164,619	+				+1.0
3,164,619	+				-2.7
3,164,652	-				-2.7
3,164,675	+				+0.4
3,164,810	+		BWI76_RS15105	0.12	+0.1
3,164,843	+		BWI76_RS15105	0.14	+1.9
3,164,844	+		BWI76_RS15105	0.14	+1.0
3,164,857	+		BWI76_RS15105	0.15	-2.8
3,164,933	-		BWI76_RS15105	0.20	+1.0
3,165,129	-		BWI76_RS15105	0.33	-2.0
3,165,152	+		BWI76_RS15105	0.35	-0.1
3,165,154	+		BWI76_RS15105	0.35	+0.4
3,165,165	+		BWI76_RS15105	0.36	+1.7
3,165,180	+		BWI76_RS15105	0.37	+0.9
3,165,180	+		BWI76_RS15105	0.37	+0.7
3,165,223	-		BWI76_RS15105	0.39	-2.2
3,165,279	-		BWI76_RS15105	0.43	+0.7
3,165,284	+		BWI76_RS15105	0.43	-1.6
3,165,284	-		BWI76_RS15105	0.43	-2.6
3,165,294	+		BWI76_RS15105	0.44	-3.0
3,165,294	+		BWI76_RS15105	0.44	+1.0
3,165,294	+		BWI76_RS15105	0.44	+2.1
3,165,302	-		BWI76_RS15105	0.45	+1.8
3,165,302	-		BWI76_RS15105	0.45	+1.4
3,165,302	-		BWI76_RS15105	0.45	+0.1
3,165,302	-		BWI76_RS15105	0.45	+0.9
3,165,302	-		BWI76_RS15105	0.45	+0.3
3,165,302	-		BWI76_RS15105	0.45	-2.3
3,165,373	+				-0.0
3,165,402	+		BWI76_RS15105	0.51	+1.7
3,165,412	+		BWI76_RS15105	0.52	-0.2
3,165,418	+		BWI76_RS15105	0.52	-2.2
3,165,467	-		BWI76_RS15105	0.55	+0.5
3,165,476	+		BWI76_RS15105	0.56	-3.0
3,165,476	+		BWI76_RS15105	0.56	+0.2
3,165,484	-		BWI76_RS15105	0.57	-0.6
3,165,486	+		BWI76_RS15105	0.57	-1.6
3,165,502	-		BWI76_RS15105	0.58	-1.0
3,165,504	+		BWI76_RS15105	0.58	+0.8
3,165,504	+		BWI76_RS15105	0.58	-0.5
3,165,509	+		BWI76_RS15105	0.58	+0.5
3,165,510	-		BWI76_RS15105	0.58	-0.7
3,165,512	-		BWI76_RS15105	0.58	-1.3
3,165,512	-		BWI76_RS15105	0.58	-0.0
3,165,512	-		BWI76_RS15105	0.58	+0.4
3,165,512	-		BWI76_RS15105	0.58	+0.1
3,165,526	-		BWI76_RS15105	0.59	+1.0
3,165,526	-		BWI76_RS15105	0.59	+0.0
3,165,590	-		BWI76_RS15105	0.64	-0.4
3,165,614	-		BWI76_RS15105	0.65	-0.6
3,165,616	-		BWI76_RS15105	0.65	-3.0
3,165,616	-		BWI76_RS15105	0.65	-0.4
3,165,629	+		BWI76_RS15105	0.66	+1.5
3,165,634	+		BWI76_RS15105	0.66	+2.0
3,165,649	+		BWI76_RS15105	0.67	-1.0
3,165,649	+		BWI76_RS15105	0.67	-0.0
3,165,649	+		BWI76_RS15105	0.67	-1.0
3,165,649	+		BWI76_RS15105	0.67	-0.7
3,165,649	+		BWI76_RS15105	0.67	+0.1
3,165,649	+		BWI76_RS15105	0.67	+0.8
3,165,649	+		BWI76_RS15105	0.67	+1.0
3,165,657	-		BWI76_RS15105	0.68	+0.1
3,165,657	-		BWI76_RS15105	0.68	+0.8
3,165,657	-		BWI76_RS15105	0.68	+3.2
3,165,657	-		BWI76_RS15105	0.68	+1.2
3,165,657	-		BWI76_RS15105	0.68	-0.6
3,165,657	-		BWI76_RS15105	0.68	+2.2
3,165,707	+		BWI76_RS15105	0.71	-2.2
3,165,715	-		BWI76_RS15105	0.72	+1.6
3,165,721	+		BWI76_RS15105	0.72	-1.8
3,165,728	+				-0.7
3,165,741	-		BWI76_RS15105	0.74	-0.0
3,165,760	-		BWI76_RS15105	0.75	+0.9
3,165,760	-		BWI76_RS15105	0.75	+1.0
3,165,770	-		BWI76_RS15105	0.75	-0.1
3,165,791	+				-3.3
3,165,804	-		BWI76_RS15105	0.78	-0.4
3,165,849	+		BWI76_RS15105	0.81	-0.6
3,165,858	-		BWI76_RS15105	0.81	+0.6
3,165,890	-		BWI76_RS15105	0.83	-1.8
3,165,890	-		BWI76_RS15105	0.83	+0.8
3,165,900	+		BWI76_RS15105	0.84	-3.0
3,165,910	+		BWI76_RS15105	0.85	-0.6
3,165,918	-		BWI76_RS15105	0.85	+0.4
3,165,918	-		BWI76_RS15105	0.85	-0.0
3,165,918	-		BWI76_RS15105	0.85	-0.0
3,165,918	-		BWI76_RS15105	0.85	+1.4
3,165,918	-		BWI76_RS15105	0.85	-1.5
3,165,950	+		BWI76_RS15105	0.87	+0.4
3,165,963	+		BWI76_RS15105	0.88	-1.6
3,166,019	+				-0.0
3,166,019	+				+0.5
3,166,021	+				-1.0
3,166,021	+				+1.4
3,166,021	+				-0.6
3,166,021	+				-0.1
3,166,029	+				-0.8
3,166,031	+				-0.1
3,166,088	+				+0.3
3,166,094	+				-1.2
3,166,123	+				+0.5
3,166,203	+				+2.0
3,166,211	-				+3.3
3,166,215	-				-1.6
3,166,220	-				-2.6
3,166,220	-				+1.0
3,166,230	-				+1.1
3,166,230	-				-0.8
3,166,232	-				-1.6
3,166,291	-				-1.3
3,166,291	-				-0.6
3,166,300	-				-2.5
3,166,301	-				-0.0
3,166,302	-				-2.8
3,166,302	-				+1.0
3,166,308	-				-1.0
3,166,338	+				-0.0
3,166,346	-				-1.8
3,166,389	-				-3.1
3,166,389	-				-1.8
3,166,439	-				-0.6
3,166,441	-				-2.2
3,166,441	-				-0.6
3,166,441	-				-2.0
3,166,441	-				-3.7
3,166,448	-				-2.7
3,166,510	-		BWI76_RS15110	0.12	-2.0
3,166,629	+		BWI76_RS15110	0.18	-0.0
3,166,681	+		BWI76_RS15110	0.20	-1.6
3,166,682	+		BWI76_RS15110	0.20	-1.0
3,166,682	+		BWI76_RS15110	0.20	+1.0
3,166,691	-		BWI76_RS15110	0.20	+1.0
3,166,691	-		BWI76_RS15110	0.20	-1.0
3,166,691	-		BWI76_RS15110	0.20	-2.3
3,166,691	-		BWI76_RS15110	0.20	-2.5
3,166,691	-		BWI76_RS15110	0.20	-0.0
3,166,691	-		BWI76_RS15110	0.20	-1.3
3,166,691	-		BWI76_RS15110	0.20	-0.6
3,166,691	-		BWI76_RS15110	0.20	-0.6
3,166,737	-		BWI76_RS15110	0.22	+1.0
3,166,742	-		BWI76_RS15110	0.23	-1.6
3,166,750	-		BWI76_RS15110	0.23	-0.0
3,166,750	-		BWI76_RS15110	0.23	-1.3
3,166,755	-		BWI76_RS15110	0.23	+1.0
3,166,755	-		BWI76_RS15110	0.23	-2.2
3,166,755	-		BWI76_RS15110	0.23	-0.0
3,166,758	+		BWI76_RS15110	0.23	+1.0
3,166,760	-		BWI76_RS15110	0.23	-1.3
3,166,769	-		BWI76_RS15110	0.24	-2.3
3,166,771	+		BWI76_RS15110	0.24	+1.0
3,166,771	+		BWI76_RS15110	0.24	+1.0
3,166,771	+		BWI76_RS15110	0.24	-2.2
3,166,779	-		BWI76_RS15110	0.24	-2.9
3,166,779	-				+1.0
3,166,812	-		BWI76_RS15110	0.26	+1.0
3,166,817	-		BWI76_RS15110	0.26	-0.0
3,166,833	-		BWI76_RS15110	0.27	-0.0
3,166,835	+		BWI76_RS15110	0.27	+1.0
3,166,852	-		BWI76_RS15110	0.28	+1.0
3,166,900	-		BWI76_RS15110	0.30	-1.0
3,166,981	+		BWI76_RS15110	0.33	-1.0
3,166,989	-		BWI76_RS15110	0.34	-3.0
3,167,015	-		BWI76_RS15110	0.35	-0.0
3,167,048	-		BWI76_RS15110	0.36	-0.0
3,167,048	-		BWI76_RS15110	0.36	-2.9
3,167,054	+		BWI76_RS15110	0.36	-0.0
3,167,062	-		BWI76_RS15110	0.37	+1.0
3,167,095	-		BWI76_RS15110	0.38	-0.6