Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07155

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
1,501,545	+		BWI76_RS07145	0.47	+1.2
1,501,545	+		BWI76_RS07145	0.47	-0.2
1,501,545	+		BWI76_RS07145	0.47	-3.1
1,501,560	+		BWI76_RS07145	0.48	+1.5
1,501,568	-		BWI76_RS07145	0.49	+0.5
1,501,577	-		BWI76_RS07145	0.51	+0.9
1,501,684	+		BWI76_RS07145	0.64	-2.1
1,501,730	+		BWI76_RS07145	0.70	-0.4
1,501,730	+		BWI76_RS07145	0.70	-1.1
1,501,767	-		BWI76_RS07145	0.75	-0.6
1,501,772	+		BWI76_RS07145	0.76	+0.9
1,501,777	+		BWI76_RS07145	0.76	-1.1
1,501,777	+		BWI76_RS07145	0.76	-1.4
1,501,777	+		BWI76_RS07145	0.76	-0.6
1,501,777	+		BWI76_RS07145	0.76	+0.9
1,501,777	+		BWI76_RS07145	0.76	-2.2
1,501,777	+		BWI76_RS07145	0.76	+0.9
1,501,777	+		BWI76_RS07145	0.76	+0.9
1,501,777	+		BWI76_RS07145	0.76	+1.1
1,501,777	+		BWI76_RS07145	0.76	-1.4
1,501,777	+		BWI76_RS07145	0.76	+0.9
1,501,777	+		BWI76_RS07145	0.76	-1.4
1,501,777	+		BWI76_RS07145	0.76	-0.9
1,501,777	+		BWI76_RS07145	0.76	+1.1
1,501,777	+		BWI76_RS07145	0.76	-0.9
1,501,777	+		BWI76_RS07145	0.76	-1.6
1,501,777	+		BWI76_RS07145	0.76	-1.1
1,501,777	+		BWI76_RS07145	0.76	+0.4
1,501,777	+		BWI76_RS07145	0.76	-0.3
1,501,777	+		BWI76_RS07145	0.76	+1.1
1,501,777	+		BWI76_RS07145	0.76	-2.9
1,501,777	+		BWI76_RS07145	0.76	-3.1
1,501,777	+		BWI76_RS07145	0.76	+0.5
1,501,785	-		BWI76_RS07145	0.78	-0.1
1,501,785	-		BWI76_RS07145	0.78	+0.9
1,501,785	-		BWI76_RS07145	0.78	-3.4
1,501,785	-		BWI76_RS07145	0.78	-1.1
1,501,785	-		BWI76_RS07145	0.78	-0.1
1,501,785	-		BWI76_RS07145	0.78	+0.7
1,501,785	-		BWI76_RS07145	0.78	+0.3
1,501,785	-		BWI76_RS07145	0.78	+1.4
1,501,785	-		BWI76_RS07145	0.78	+0.5
1,501,785	-		BWI76_RS07145	0.78	-0.1
1,501,785	-		BWI76_RS07145	0.78	-1.1
1,501,785	-		BWI76_RS07145	0.78	-0.1
1,501,788	+		BWI76_RS07145	0.78	-0.1
1,501,796	-		BWI76_RS07145	0.79	-0.6
1,501,796	-		BWI76_RS07145	0.79	-1.1
1,501,797	+		BWI76_RS07145	0.79	+0.8
1,501,805	-		BWI76_RS07145	0.80	-1.1
1,501,889	+				+1.1
1,501,900	+				-2.4
1,501,900	+				-0.7
1,501,900	+				+1.9
1,501,935	+				-0.1
1,501,935	+				+1.3
1,501,943	-				+0.2
1,501,947	+				+0.3
1,501,947	+				-1.1
1,501,967	-				-0.1
1,502,183	+		BWI76_RS07150	0.47	-1.4
1,502,208	+		BWI76_RS07150	0.52	+0.9
1,502,208	+		BWI76_RS07150	0.52	-0.1
1,502,208	+		BWI76_RS07150	0.52	-0.6
1,502,208	+		BWI76_RS07150	0.52	-3.4
1,502,216	-		BWI76_RS07150	0.54	-1.4
1,502,216	-		BWI76_RS07150	0.54	-0.8
1,502,216	-		BWI76_RS07150	0.54	+0.0
1,502,216	-		BWI76_RS07150	0.54	+0.4
1,502,217	-		BWI76_RS07150	0.54	-2.2
1,502,236	+		BWI76_RS07150	0.58	-0.1
1,502,315	-		BWI76_RS07150	0.74	-1.1
1,502,326	+		BWI76_RS07150	0.76	-1.2
1,502,354	+		BWI76_RS07150	0.82	-0.6
1,502,365	+		BWI76_RS07150	0.84	-1.1
1,502,373	+		BWI76_RS07150	0.86	+1.8
1,502,376	+		BWI76_RS07150	0.86	+1.7
1,502,376	+		BWI76_RS07150	0.86	-1.7
1,502,376	+		BWI76_RS07150	0.86	+0.5
1,502,381	+		BWI76_RS07150	0.87	-1.4
1,502,384	-		BWI76_RS07150	0.88	-0.1
1,502,384	-		BWI76_RS07150	0.88	+1.0
1,502,385	+		BWI76_RS07150	0.88	-0.6
1,502,393	-				-0.1
1,502,394	-				+0.5
1,502,395	+				+0.4
1,502,397	+				+0.4
1,502,397	+				+2.2
1,502,397	+				-0.3
1,502,403	-				-1.1
1,502,410	+				-1.5
1,502,410	+				-0.5
1,502,410	+				-1.6
1,502,410	+				-0.5
1,502,410	+				+0.5
1,502,410	+				-2.4
1,502,410	+				+1.6
1,502,410	+				-0.1
1,502,410	+				+1.7
1,502,410	+				-0.2
1,502,410	+				-1.4
1,502,410	-				-0.1
1,502,417	+				+2.1
1,502,418	-				-0.6
1,502,418	-				-1.1
1,502,418	-				+0.3
1,502,418	-				+0.2
1,502,418	-				-0.1
1,502,418	-				+0.3
1,502,418	-				+0.7
1,502,418	-				-1.7
1,502,418	-				-0.5
1,502,418	-				-2.2
1,502,418	-				-0.7
1,502,418	-				-0.2
1,502,456	+				-2.4
1,502,461	+				-2.1
1,502,474	+				+1.3
1,502,474	+				-3.1
1,502,506	-				+1.6
1,502,513	+				+0.8
1,502,524	+				-2.0
1,502,530	+				-1.2
1,502,530	+				-0.7
1,502,536	+				+1.7
1,502,536	+				-0.4
1,502,539	-				+0.8
1,502,549	+				-1.4
1,502,549	+				-0.5
1,502,549	+				-1.7
1,502,549	+				+1.6
1,502,549	+				-1.1
1,502,549	+				-2.1
1,502,555	+				+1.5
1,502,557	+				-0.8
1,502,557	-				+0.6
1,502,557	-				-0.5
1,502,557	-				-0.3
1,502,557	-				+0.5
1,502,557	-				-3.4
1,502,557	-				+1.2
1,502,557	-				-1.1
1,502,565	-				+1.2
1,502,570	+				-1.7
1,502,570	+				-2.7
1,502,570	+				-1.6
1,502,570	+				+0.1
1,502,573	-				+1.6
1,502,573	-				-2.8
1,502,578	-				-0.2
1,502,578	-				-1.4
1,502,578	-				-1.2
1,502,588	+				+0.9
1,502,596	-				+1.9
1,502,596	-				+0.8
1,502,603	-				+0.5
1,502,640	+				-0.3
1,502,642	-				+1.2
1,502,648	-				+1.9
1,502,699	-				+1.1
1,502,833	+		BWI76_RS07155	0.16	-4.0
1,502,841	-		BWI76_RS07155	0.17	-1.6
1,502,867	-		BWI76_RS07155	0.18	+0.4
1,502,872	-		BWI76_RS07155	0.18	+0.9
1,502,907	+		BWI76_RS07155	0.20	-1.0
1,503,017	+		BWI76_RS07155	0.26	+0.5
1,503,017	+		BWI76_RS07155	0.26	+0.5
1,503,025	-		BWI76_RS07155	0.26	+1.6
1,503,025	-		BWI76_RS07155	0.26	+2.4
1,503,025	-		BWI76_RS07155	0.26	+0.0
1,503,025	-		BWI76_RS07155	0.26	-0.6
1,503,034	+				+2.5
1,503,102	+		BWI76_RS07155	0.30	+2.3
1,503,279	-		BWI76_RS07155	0.39	+0.3
1,503,302	+		BWI76_RS07155	0.40	+0.6
1,503,777	-		BWI76_RS07155	0.64	+0.6
1,503,896	+		BWI76_RS07155	0.70	+0.4
1,503,902	-		BWI76_RS07155	0.70	-3.7
1,503,902	-		BWI76_RS07155	0.70	+1.7
1,503,964	-		BWI76_RS07155	0.73	+0.5
1,504,062	+		BWI76_RS07155	0.78	+0.2
1,504,079	+		BWI76_RS07155	0.79	+1.1
1,504,079	+		BWI76_RS07155	0.79	-1.9
1,504,087	-		BWI76_RS07155	0.80	+0.8
1,504,087	-		BWI76_RS07155	0.80	+0.9
1,504,385	+				+3.1
1,504,409	+				-0.4
1,504,449	+				+1.2
1,504,463	+				-0.5
1,504,587	+				+0.8
1,504,587	+				-1.8
1,504,633	+				+0.7
1,504,660	-				-0.6
1,504,675	+				-0.6
1,504,700	+				+0.2
1,504,712	+				+1.6
1,504,720	-				+0.4
1,504,799	+		BWI76_RS07160	0.17	+0.0
1,504,802	-		BWI76_RS07160	0.17	-2.4
1,504,802	-		BWI76_RS07160	0.17	-0.5
1,504,941	-		BWI76_RS07160	0.34	-1.6
1,505,289	+		BWI76_RS07160	0.76	+2.0