Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05825

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
1,222,755	-		BWI76_RS05820	0.58	-0.6
1,222,755	-				-0.6
1,222,792	+		BWI76_RS05820	0.60	-1.6
1,222,800	-		BWI76_RS05820	0.60	-0.0
1,222,800	-		BWI76_RS05820	0.60	-0.0
1,222,800	-		BWI76_RS05820	0.60	+2.0
1,222,800	-		BWI76_RS05820	0.60	+1.0
1,222,800	-		BWI76_RS05820	0.60	+1.8
1,222,800	-		BWI76_RS05820	0.60	+1.0
1,222,800	-		BWI76_RS05820	0.60	+1.0
1,223,122	+		BWI76_RS05820	0.75	+1.0
1,223,212	-		BWI76_RS05820	0.80	+1.0
1,223,359	-		BWI76_RS05820	0.87	+0.3
1,223,359	-		BWI76_RS05820	0.87	-2.8
1,223,430	-		BWI76_RS05820	0.90	-1.5
1,223,475	-				+1.0
1,223,480	-				-1.1
1,223,488	-				+1.2
1,223,501	-				-3.6
1,223,529	-				+2.3
1,223,529	-				-2.2
1,223,553	-				-0.6
1,223,648	-				+3.0
1,223,807	-		BWI76_RS05825	0.14	+1.4
1,223,822	+		BWI76_RS05825	0.16	-1.2
1,223,823	+		BWI76_RS05825	0.16	+0.2
1,223,823	+		BWI76_RS05825	0.16	+1.1
1,223,830	-		BWI76_RS05825	0.16	+0.1
1,223,830	-		BWI76_RS05825	0.16	+0.2
1,223,837	-		BWI76_RS05825	0.17	+1.5
1,223,837	-		BWI76_RS05825	0.17	+0.9
1,223,876	+		BWI76_RS05825	0.20	-1.6
1,223,876	+		BWI76_RS05825	0.20	-1.5
1,223,876	+		BWI76_RS05825	0.20	-0.8
1,223,884	-		BWI76_RS05825	0.21	+0.2
1,223,884	-		BWI76_RS05825	0.21	-1.4
1,223,884	-		BWI76_RS05825	0.21	-3.5
1,223,884	-		BWI76_RS05825	0.21	+1.5
1,223,884	-		BWI76_RS05825	0.21	-2.1
1,223,884	-		BWI76_RS05825	0.21	+1.0
1,223,884	-		BWI76_RS05825	0.21	-0.0
1,223,884	-		BWI76_RS05825	0.21	+0.1
1,223,884	-		BWI76_RS05825	0.21	-3.5
1,223,893	+		BWI76_RS05825	0.22	-2.2
1,223,893	+		BWI76_RS05825	0.22	-2.0
1,223,901	-		BWI76_RS05825	0.22	-1.8
1,223,901	-		BWI76_RS05825	0.22	-0.1
1,223,904	+		BWI76_RS05825	0.23	-1.6
1,223,904	+		BWI76_RS05825	0.23	-1.0
1,223,907	-		BWI76_RS05825	0.23	+1.3
1,223,907	-		BWI76_RS05825	0.23	-2.4
1,223,907	-		BWI76_RS05825	0.23	+0.2
1,223,911	-		BWI76_RS05825	0.23	+0.3
1,223,913	+		BWI76_RS05825	0.23	-1.6
1,223,939	+		BWI76_RS05825	0.25	+0.3
1,223,945	-		BWI76_RS05825	0.26	+0.2
1,223,955	-		BWI76_RS05825	0.27	-0.6
1,223,973	+		BWI76_RS05825	0.28	-0.6
1,223,994	-		BWI76_RS05825	0.30	-0.9
1,224,002	+		BWI76_RS05825	0.31	-1.0
1,224,010	-		BWI76_RS05825	0.31	-0.4
1,224,010	-		BWI76_RS05825	0.31	-1.7
1,224,010	-		BWI76_RS05825	0.31	-0.1
1,224,010	-		BWI76_RS05825	0.31	+0.8
1,224,010	-		BWI76_RS05825	0.31	+2.8
1,224,010	-		BWI76_RS05825	0.31	+0.7
1,224,010	-		BWI76_RS05825	0.31	-0.3
1,224,010	-		BWI76_RS05825	0.31	+0.8
1,224,010	-		BWI76_RS05825	0.31	+0.5
1,224,010	-		BWI76_RS05825	0.31	-0.4
1,224,057	-		BWI76_RS05825	0.35	-0.4
1,224,057	-		BWI76_RS05825	0.35	-1.8
1,224,057	-		BWI76_RS05825	0.35	+0.8
1,224,057	-		BWI76_RS05825	0.35	-2.0
1,224,072	+		BWI76_RS05825	0.37	+1.0
1,224,072	+		BWI76_RS05825	0.37	+0.6
1,224,080	-		BWI76_RS05825	0.37	-0.6
1,224,080	-				+1.0
1,224,106	+		BWI76_RS05825	0.40	+1.7
1,224,132	+		BWI76_RS05825	0.42	+0.4
1,224,133	+		BWI76_RS05825	0.42	-2.0
1,224,140	-		BWI76_RS05825	0.42	-0.4
1,224,154	+		BWI76_RS05825	0.44	+1.0
1,224,154	+		BWI76_RS05825	0.44	-0.0
1,224,160	-		BWI76_RS05825	0.44	+1.4
1,224,162	+		BWI76_RS05825	0.44	-0.2
1,224,162	-		BWI76_RS05825	0.44	+0.1
1,224,162	-		BWI76_RS05825	0.44	+0.4
1,224,162	-		BWI76_RS05825	0.44	-1.2
1,224,162	-		BWI76_RS05825	0.44	+0.1
1,224,170	-				+1.6
1,224,170	-		BWI76_RS05825	0.45	+1.0
1,224,182	-		BWI76_RS05825	0.46	-1.0
1,224,224	+		BWI76_RS05825	0.50	-0.0
1,224,249	-		BWI76_RS05825	0.52	+0.1
1,224,302	+		BWI76_RS05825	0.56	-2.9
1,224,302	+		BWI76_RS05825	0.56	-0.6
1,224,310	-		BWI76_RS05825	0.57	+2.5
1,224,310	-		BWI76_RS05825	0.57	+4.0
1,224,310	-		BWI76_RS05825	0.57	-1.3
1,224,310	-		BWI76_RS05825	0.57	-0.5
1,224,315	-		BWI76_RS05825	0.57	-1.0
1,224,323	-		BWI76_RS05825	0.58	-1.8
1,224,370	+		BWI76_RS05825	0.62	-0.7
1,224,378	-		BWI76_RS05825	0.63	+1.0
1,224,378	-		BWI76_RS05825	0.63	-0.6
1,224,508	+		BWI76_RS05825	0.74	-1.8
1,224,722	+				+1.3
1,224,765	-				+1.0
1,224,766	+				-1.6
1,224,772	-				-0.1
1,224,869	-				+0.5
1,225,339	+		BWI76_RS05835	0.13	-1.0
1,225,528	-		BWI76_RS05835	0.28	-2.2