Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34660

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,382,236	+		BPHYT_RS34655	0.32	+1.4
3,382,780	+		BPHYT_RS34655	0.78	+0.3
3,382,983	+				-0.6
3,383,035	-				-0.3
3,383,122	-				+0.3
3,383,122	-				-1.8
3,383,124	-				-1.5
3,383,124	-				-0.4
3,383,558	-		BPHYT_RS34660	0.56	-1.6
3,383,558	-				+2.2
3,383,642	+		BPHYT_RS34660	0.70	+0.1
3,383,642	+		BPHYT_RS34660	0.70	+0.2
3,383,643	-		BPHYT_RS34660	0.70	-0.8
3,383,646	+		BPHYT_RS34660	0.70	+0.1
3,383,646	+		BPHYT_RS34660	0.70	-1.0
3,383,647	-		BPHYT_RS34660	0.70	-1.2
3,383,755	+		BPHYT_RS34660	0.87	-0.0
3,383,816	+				-0.0
3,383,904	-				-2.0
3,383,906	-				+0.2
3,383,992	+		BPHYT_RS34665	0.13	+0.6
3,384,046	+		BPHYT_RS34665	0.27	-1.0
3,384,046	+		BPHYT_RS34665	0.27	-0.1
3,384,047	-		BPHYT_RS34665	0.27	-0.8
3,384,070	-		BPHYT_RS34665	0.33	+4.2
3,384,368	-				-0.0
3,384,382	+				-1.3
3,384,553	-		BPHYT_RS34670	0.14	-3.0
3,384,685	+		BPHYT_RS34670	0.26	-1.9