Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34245

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,283,531	+		BPHYT_RS34240	0.25	-0.6
3,283,531	+				+0.3
3,283,655	-		BPHYT_RS34240	0.36	-1.2
3,284,178	+		BPHYT_RS34240	0.86	-0.5
3,284,318	+				-0.2
3,284,318	+				-0.2
3,284,318	+				-1.5
3,284,319	-				-1.4
3,284,934	+		BPHYT_RS34245	0.40	-0.2
3,285,567	-		BPHYT_RS34245	0.82	-0.0
3,285,860	+				+1.5
3,286,216	+		BPHYT_RS34250	0.35	+0.0
3,286,216	+		BPHYT_RS34250	0.35	+0.2
3,286,429	+		BPHYT_RS34250	0.56	+0.1
3,286,430	-		BPHYT_RS34250	0.56	+0.9
3,286,711	+		BPHYT_RS34250	0.82	+0.4
3,286,711	+		BPHYT_RS34250	0.82	-1.8
3,286,712	-		BPHYT_RS34250	0.82	-0.9
3,286,720	+		BPHYT_RS34250	0.83	+0.4
3,286,721	-		BPHYT_RS34250	0.83	+0.5