Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30755

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,454,469	+		BPHYT_RS30750	0.58	-1.7
2,454,470	-		BPHYT_RS30750	0.58	-2.2
2,454,470	-		BPHYT_RS30750	0.58	-0.7
2,454,949	-				+0.1
2,455,037	+				-3.3
2,455,038	-				+0.4
2,455,038	-				+0.4
2,455,038	-				+0.0
2,455,118	+				-0.4
2,455,190	+		BPHYT_RS30755	0.11	-3.0
2,455,190	+		BPHYT_RS30755	0.11	+2.4
2,455,190	+		BPHYT_RS30755	0.11	+0.9
2,455,191	-		BPHYT_RS30755	0.11	-1.5
2,455,191	-		BPHYT_RS30755	0.11	-0.5
2,455,192	+		BPHYT_RS30755	0.11	+0.6
2,455,193	-		BPHYT_RS30755	0.11	+3.3
2,455,193	-		BPHYT_RS30755	0.11	-2.9
2,455,377	-		BPHYT_RS30755	0.24	+0.2
2,455,488	-				-1.2
2,455,488	-		BPHYT_RS30755	0.32	+0.2
2,456,216	+		BPHYT_RS30755	0.83	+0.7
2,456,853	-		BPHYT_RS30760	0.30	-1.8
2,457,127	-		BPHYT_RS30760	0.50	-0.8