Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30745

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,452,626	-		BPHYT_RS30740	0.39	-1.9
2,452,626	-		BPHYT_RS30740	0.39	+0.8
2,452,832	+		BPHYT_RS30740	0.59	+1.1
2,452,832	+		BPHYT_RS30740	0.59	-0.1
2,452,832	+		BPHYT_RS30740	0.59	-0.4
2,452,832	+		BPHYT_RS30740	0.59	+0.0
2,453,338	-				+0.1
2,453,338	-				-1.2
2,453,458	-				+0.4
2,453,524	-				-0.8
2,453,585	+				-0.4
2,453,585	+				-0.4
2,453,585	+				+0.4
2,453,709	+		BPHYT_RS30745	0.39	-1.6
2,453,812	-		BPHYT_RS30745	0.68	+2.0
2,453,919	+				+0.7
2,453,920	-				+0.2
2,454,469	+		BPHYT_RS30750	0.58	-1.7
2,454,470	-		BPHYT_RS30750	0.58	-2.2
2,454,470	-		BPHYT_RS30750	0.58	-0.7