Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29295

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,128,253	-		BPHYT_RS29290	0.60	-1.9
2,129,150	+		BPHYT_RS29295	0.16	-1.7
2,129,579	+		BPHYT_RS29295	0.49	-0.0
2,129,580	-		BPHYT_RS29295	0.49	+0.9
2,129,602	+		BPHYT_RS29295	0.51	+0.7
2,129,691	+		BPHYT_RS29295	0.58	-2.9
2,129,727	-		BPHYT_RS29295	0.61	-3.5
2,129,778	+		BPHYT_RS29295	0.65	+0.5
2,129,993	+		BPHYT_RS29295	0.82	-0.4
2,130,271	-				-0.1
2,130,271	-				+2.4
2,130,372	+		BPHYT_RS29300	0.25	+1.2
2,130,372	+		BPHYT_RS29300	0.25	-0.2
2,130,656	-				+0.7
2,130,687	-				+0.2
2,130,687	-				+2.0
2,130,801	-				+0.5
2,130,872	+				+0.5
2,130,991	-		BPHYT_RS29305	0.13	+2.3