Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28305

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,904,175	-				+0.8
1,904,205	-				+0.2
1,904,420	+				-0.2
1,904,494	+				+0.2
1,904,535	-				+1.1
1,904,722	+		BPHYT_RS28300	0.40	-3.7
1,904,910	+				+0.2
1,904,990	+				+3.2
1,904,990	+				-2.1
1,904,990	+				-0.4
1,904,991	-				+1.1
1,904,991	-				+0.4
1,904,991	-				-2.5
1,904,991	-				-0.5
1,905,397	-		BPHYT_RS28305	0.44	+0.8
1,905,763	+				+0.7
1,905,851	-				+0.9
1,905,878	-				+1.1
1,906,194	+				+1.4
1,906,250	-				+0.3
1,906,286	+				+0.1
1,906,299	+				-3.7
1,906,299	+				-0.4
1,906,305	+				+0.4
1,906,305	+				+2.4
1,906,305	+				-1.2
1,906,306	-				+0.5
1,906,429	+				-1.6
1,906,472	-				+1.8
1,906,488	+				+0.6
1,906,565	+				-0.6
1,906,580	-				-0.5