Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28295

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,902,756	+				-2.1
1,902,756	+				+2.3
1,902,757	-				+0.3
1,902,757	-				+0.5
1,902,759	+				-0.5
1,902,774	+				+0.4
1,902,774	+				-0.1
1,902,778	-				+0.3
1,902,778	-				+0.1
1,902,932	+				-0.3
1,902,932	+				-0.5
1,902,991	-				-0.6
1,903,145	-				-1.5
1,903,145	-				+1.6
1,903,205	+		BPHYT_RS28290	0.24	-1.9
1,903,206	-		BPHYT_RS28290	0.25	+2.2
1,903,484	+				+0.9
1,903,774	+				-0.2
1,903,774	+				+1.2
1,903,781	-				-1.2
1,903,781	-				+1.0
1,903,921	+				-0.6
1,904,034	+				-0.1
1,904,035	-				+0.2
1,904,102	+				-1.8
1,904,175	-				+0.8
1,904,205	-				+0.2
1,904,420	+				-0.2
1,904,494	+				+0.2
1,904,535	-				+1.1
1,904,722	+		BPHYT_RS28300	0.40	-3.7