Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27905

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,823,737	-		BPHYT_RS27900	0.57	+2.2
1,824,187	+				-0.7
1,824,225	-				-0.7
1,824,308	-				-1.5
1,824,548	-				+0.7
1,825,058	+		BPHYT_RS27905	0.37	+2.5
1,825,389	-		BPHYT_RS27905	0.62	-2.9
1,825,389	-		BPHYT_RS27905	0.62	-3.6
1,825,586	-		BPHYT_RS27905	0.77	-1.6
1,825,800	-				-0.2
1,825,881	-				+1.2
1,826,038	+		BPHYT_RS27910	0.13	+0.1
1,826,070	-		BPHYT_RS27910	0.17	+1.8
1,826,298	-		BPHYT_RS27910	0.46	-1.3
1,826,371	-		BPHYT_RS27910	0.56	-1.3
1,826,371	-		BPHYT_RS27910	0.56	+2.2
1,826,539	+		BPHYT_RS27910	0.77	-0.7
1,826,620	-		BPHYT_RS27910	0.87	+0.4
1,826,620	-		BPHYT_RS27910	0.87	-0.5
1,826,620	-		BPHYT_RS27910	0.87	-1.4
1,826,629	-		BPHYT_RS27910	0.88	+0.7