Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27375
Experiment: Vogels_fungal_media; pH 5.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vogels_fungal_media; pH 5.5 |
---|---|---|---|---|---|
remove | |||||
1,715,028 | - | BPHYT_RS27370 | 0.42 | -1.2 | |
1,715,118 | - | BPHYT_RS27370 | 0.49 | -0.9 | |
1,715,145 | - | BPHYT_RS27370 | 0.52 | -0.6 | |
1,715,220 | - | BPHYT_RS27370 | 0.58 | -2.8 | |
1,715,856 | - | BPHYT_RS27375 | 0.15 | +0.4 | |
1,716,265 | + | BPHYT_RS27375 | 0.64 | +0.7 | |
1,716,881 | - | -0.7 | |||
1,716,918 | + | -0.8 | |||
1,717,510 | - | BPHYT_RS27385 | 0.42 | +0.9 |
Or see this region's nucleotide sequence