Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25820

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,366,048	+		BPHYT_RS25815	0.47	+0.9
1,366,223	-		BPHYT_RS25815	0.64	-0.6
1,366,644	-				-2.1
1,367,044	-		BPHYT_RS25820	0.13	-2.6
1,367,463	+		BPHYT_RS25820	0.38	-0.4
1,367,464	-		BPHYT_RS25820	0.39	-0.9
1,368,047	+		BPHYT_RS25820	0.74	-1.2
1,368,573	-		BPHYT_RS25825	0.11	-2.8
1,368,782	+		BPHYT_RS25825	0.32	-0.5
1,368,783	-		BPHYT_RS25825	0.32	+0.5
1,368,783	-		BPHYT_RS25825	0.32	+0.5
1,369,073	+				-0.9
1,369,073	+		BPHYT_RS25825	0.61	-0.7
1,369,458	-				-0.6