Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS21990

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
489,072	+				+0.4
489,123	-				+1.5
489,123	-				+0.1
489,182	+				+0.1
489,195	-				-0.2
489,363	+				-1.3
489,423	+		BPHYT_RS21990	0.20	+1.5
489,593	+		BPHYT_RS21990	0.35	+0.2
489,653	+		BPHYT_RS21990	0.41	+0.0
489,686	+		BPHYT_RS21990	0.44	+0.5
490,571	-		BPHYT_RS21995	0.18	+0.7
491,119	-		BPHYT_RS21995	0.56	-1.1
491,202	-		BPHYT_RS21995	0.62	+3.2
491,232	+		BPHYT_RS21995	0.64	-2.3
491,252	+		BPHYT_RS21995	0.65	+0.3