Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11595
Experiment: Vogels_fungal_media; pH 5.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vogels_fungal_media; pH 5.5 |
---|---|---|---|---|---|
remove | |||||
2,633,492 | - | +1.0 | |||
2,633,540 | - | +0.7 | |||
2,633,964 | - | +0.8 | |||
2,634,172 | + | BPHYT_RS11595 | 0.27 | -2.3 | |
2,634,845 | - | +0.2 | |||
2,634,909 | - | -0.6 | |||
2,634,927 | - | +0.1 | |||
2,635,145 | + | BPHYT_RS11600 | 0.17 | +1.7 | |
2,635,158 | - | BPHYT_RS11600 | 0.18 | +1.2 | |
2,635,251 | - | BPHYT_RS11600 | 0.25 | +0.2 |
Or see this region's nucleotide sequence