Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10480

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,383,061	-				-2.8
2,383,253	+		BPHYT_RS10480	0.16	-0.7
2,383,710	+				+2.4
2,383,710	+		BPHYT_RS10480	0.36	+1.8
2,383,710	+				+1.4
2,384,053	+				-1.5
2,384,121	-		BPHYT_RS10480	0.54	-2.6
2,384,122	+		BPHYT_RS10480	0.55	+1.4
2,384,122	+		BPHYT_RS10480	0.55	+0.2
2,384,224	+		BPHYT_RS10480	0.59	+2.0
2,384,789	-		BPHYT_RS10480	0.84	+0.9
2,384,789	-		BPHYT_RS10480	0.84	-0.6
2,384,899	+		BPHYT_RS10480	0.88	-1.1
2,384,900	-		BPHYT_RS10480	0.89	-2.3
2,385,223	-				-1.8