Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10430

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,370,020	+		BPHYT_RS10425	0.26	-0.4
2,370,021	-		BPHYT_RS10425	0.26	-2.4
2,370,159	+		BPHYT_RS10425	0.43	+0.6
2,370,419	+		BPHYT_RS10425	0.74	+0.3
2,370,507	+		BPHYT_RS10425	0.85	+0.7
2,370,508	-		BPHYT_RS10425	0.85	+0.3
2,370,527	+		BPHYT_RS10425	0.87	-3.1
2,370,596	+				+1.3
2,370,597	-				+0.1
2,370,659	-				+0.5
2,370,674	-				+0.9
2,370,689	-				+0.3
2,371,277	-		BPHYT_RS10430	0.58	+0.5
2,371,372	+		BPHYT_RS10430	0.66	-0.9
2,371,603	-		BPHYT_RS10430	0.87	+1.2
2,371,868	-				+0.6
2,371,984	-				+0.7
2,372,158	-				+0.9
2,372,265	+				+0.1
2,372,365	+				+0.8
2,372,366	-		BPHYT_RS10435	0.10	-0.1
2,372,459	-		BPHYT_RS10435	0.25	-1.4
2,372,571	-		BPHYT_RS10435	0.43	+0.2
2,372,640	+		BPHYT_RS10435	0.54	-2.3