Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06415

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,459,493	-		BPHYT_RS06410	0.63	+0.8
1,459,516	+		BPHYT_RS06410	0.66	-1.7
1,459,569	-		BPHYT_RS06410	0.74	-2.6
1,459,725	-				+0.1
1,459,764	+				-1.5
1,459,801	-				+0.4
1,460,172	+				-0.1
1,460,173	-				+1.1
1,460,300	+				+0.6
1,460,300	+				-2.6
1,460,300	+				+0.1
1,460,300	+				-3.1
1,460,301	-				+0.1
1,460,301	-				-2.9
1,460,301	-				-0.0
1,460,301	-				-1.4
1,460,339	+		BPHYT_RS06415	0.14	-0.8
1,460,540	+		BPHYT_RS06415	0.45	+0.1
1,460,754	-		BPHYT_RS06415	0.78	-1.0
1,460,824	-		BPHYT_RS06415	0.89	-2.3
1,460,918	-				+0.1
1,460,988	+				+0.8
1,461,190	+				-1.5
1,461,200	-				-0.8