Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06290

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,433,241	+		BPHYT_RS06280	0.68	-2.5
1,433,375	+				+0.8
1,433,375	+				-0.4
1,433,376	-				-0.1
1,433,386	+				-0.7
1,433,387	-				-0.5
1,433,725	-		BPHYT_RS06285	0.34	-0.1
1,433,739	-		BPHYT_RS06285	0.37	+0.0
1,434,014	-				-0.7
1,434,101	+				+0.8
1,434,429	-		BPHYT_RS06290	0.90	+0.7
1,434,492	+				-2.4
1,434,564	+				-2.5
1,435,031	+		BPHYT_RS06295	0.21	+2.0
1,435,032	-		BPHYT_RS06295	0.21	+1.0
1,435,089	-		BPHYT_RS06295	0.24	-0.7