Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04780

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,102,477	+		BPHYT_RS04770	0.89	+0.7
1,102,477	+		BPHYT_RS04770	0.89	+0.5
1,102,478	-		BPHYT_RS04770	0.89	-2.7
1,102,481	+		BPHYT_RS04770	0.89	+1.7
1,102,482	-		BPHYT_RS04770	0.90	+0.9
1,102,482	-		BPHYT_RS04770	0.90	-0.3
1,102,513	+				+0.1
1,102,514	-				-0.1
1,102,619	-				+0.6
1,102,619	-				-0.8
1,102,692	+		BPHYT_RS04775	0.15	-0.0
1,102,693	-		BPHYT_RS04775	0.15	+2.9
1,102,694	+		BPHYT_RS04775	0.15	+1.2
1,102,789	+		BPHYT_RS04775	0.27	+0.3
1,102,941	+		BPHYT_RS04775	0.46	-0.1
1,103,584	+		BPHYT_RS04780	0.36	-0.8