Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04730

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,092,749	+		BPHYT_RS04725	0.44	-3.7
1,092,749	+		BPHYT_RS04725	0.44	-2.1
1,092,885	-		BPHYT_RS04725	0.52	-4.6
1,092,982	+		BPHYT_RS04725	0.58	-2.8
1,092,982	+		BPHYT_RS04725	0.58	-3.0
1,093,340	+		BPHYT_RS04725	0.79	-2.2
1,093,346	+		BPHYT_RS04725	0.79	-5.3
1,093,347	-		BPHYT_RS04725	0.80	-4.6
1,093,347	-		BPHYT_RS04725	0.80	-2.4
1,093,385	-		BPHYT_RS04725	0.82	-4.1
1,093,622	+				-2.4
1,093,662	-				-4.0
1,093,721	+				-5.1
1,093,721	+				-4.0
1,093,721	+				-2.9
1,093,722	-				-5.1
1,094,034	+		BPHYT_RS04730	0.59	-1.3
1,094,034	+		BPHYT_RS04730	0.59	-5.7
1,094,035	-		BPHYT_RS04730	0.60	-5.0
1,094,178	+		BPHYT_RS04730	0.86	-1.2
1,095,105	+				-3.1
1,095,106	-				-2.2