Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03585

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
812,818	-				-1.2
813,165	+		BPHYT_RS03580	0.79	+0.5
813,165	+		BPHYT_RS03580	0.79	+0.1
813,166	-		BPHYT_RS03580	0.80	-0.3
813,166	-		BPHYT_RS03580	0.80	-2.0
813,384	+				-0.8
813,409	-				-0.2
813,439	+				-0.3
813,439	+				+0.3
813,440	-				-0.2
813,442	-				-0.6
813,442	-				+0.2
813,492	-				-0.5
813,492	-				+0.3
813,492	-				-2.1
813,492	-				-1.3
813,492	-				-0.1
813,492	-				+0.8
813,492	-				-1.1
813,502	+				-0.1
813,502	+				+0.3
813,502	+				+0.5
813,503	-				-0.1
813,503	-				+0.0
813,503	-				+0.0
813,550	-				+0.1
813,558	+				+0.4
813,559	-				+0.2
813,751	+				-0.6
813,751	+				+0.1
813,755	+				-0.4
813,755	+				-0.4
814,354	+				-2.1
814,355	-				+0.5
814,493	-				-0.5
814,505	-				+0.3
814,508	+				-0.7
814,508	+				-0.6
814,508	+				-1.3
814,508	+				-0.9
814,509	-				-0.4
814,510	+				-0.2
814,511	-				+0.0
814,617	+				+0.2
814,741	+				-2.3
814,741	+				-0.8
814,741	+				-1.1
814,741	+				+0.3
814,741	+				-0.2