Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS02350

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
537,778	+				-0.9
537,778	+				+0.3
537,778	+				+1.3
537,778	+				+0.2
537,778	+				+0.7
537,779	-				+1.7
537,779	-				-0.5
537,779	-				-0.7
537,779	-				-0.3
537,827	-				+1.4
538,324	+		BPHYT_RS02345	0.60	-0.7
538,324	+		BPHYT_RS02345	0.60	-1.1
538,324	+		BPHYT_RS02345	0.60	+1.6
538,324	+		BPHYT_RS02345	0.60	+0.3
538,325	-		BPHYT_RS02345	0.60	-0.3
538,325	-		BPHYT_RS02345	0.60	-0.3
538,325	-		BPHYT_RS02345	0.60	-0.1
538,327	+		BPHYT_RS02345	0.60	-0.1
538,327	+				+4.1
538,328	-		BPHYT_RS02345	0.60	-0.3
538,698	+				-0.1
538,699	-				+2.5
538,758	+				-0.8
539,597	+				+0.5
539,597	+				+0.1
539,785	+				+0.6
539,785	+				-1.1
539,786	-				+0.7
539,786	-				-0.2
539,788	+				-0.6
539,788	+				-0.7
539,791	+				+0.3
539,791	+				+0.0
539,791	+				+0.2
539,791	+				+1.2
539,792	-				+0.7
539,792	-				-1.8
539,792	-				+0.8
539,794	-				-2.3
539,795	+				+0.3
539,795	+				-0.6
539,795	+				-3.1
539,796	-				-1.0
539,802	+				-0.4
539,963	+				+0.2
540,075	+				-3.0
540,075	+				-0.3
540,075	+				+0.6
540,105	+				+0.2
540,115	+				-0.3
540,115	+				-1.4
540,115	+				-1.8
540,160	+				+1.1