Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20130

Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
4,216,028	-				-1.6
4,216,073	-				-0.8
4,216,074	-				+1.2
4,216,336	+		BWI76_RS20125	0.19	+2.8
4,216,357	-		BWI76_RS20125	0.22	+0.2
4,216,449	+		BWI76_RS20125	0.39	+0.2
4,216,529	+		BWI76_RS20125	0.54	-3.8
4,216,538	+		BWI76_RS20125	0.55	+1.1
4,216,539	-		BWI76_RS20125	0.55	-1.6
4,216,545	-		BWI76_RS20125	0.57	-1.6
4,216,546	-		BWI76_RS20125	0.57	+3.5
4,216,666	-		BWI76_RS20125	0.78	-0.8
4,216,719	+		BWI76_RS20125	0.88	-2.3
4,216,719	+		BWI76_RS20125	0.88	+0.2
4,216,723	-		BWI76_RS20125	0.89	+2.8
4,216,727	-		BWI76_RS20125	0.89	-3.0
4,216,728	-		BWI76_RS20125	0.90	-1.4
4,216,740	+				+0.2
4,216,741	+				-0.9
4,216,798	+				-2.0
4,216,798	+				-1.8
4,216,806	-				-1.8
4,216,808	+				+0.3
4,216,811	-				+0.2
4,216,958	-				-1.4
4,216,983	-				+0.3
4,216,990	+				-1.8
4,216,993	-				-0.9
4,216,993	-				+1.0
4,217,006	-				-0.7
4,217,010	+				-1.1
4,217,010	+				-1.4
4,217,015	+				-1.4
4,217,015	+				-3.3
4,217,020	+				-0.8
4,217,028	-				-2.3
4,217,042	+				-1.1
4,217,046	+				-2.7
4,217,050	-				-0.5
4,217,050	-				-2.9
4,217,090	+				+1.2
4,217,145	+		BWI76_RS20130	0.11	-1.1
4,217,145	+		BWI76_RS20130	0.11	-3.3
4,217,160	-		BWI76_RS20130	0.12	-4.6
4,217,427	+		BWI76_RS20130	0.30	-0.1
4,217,435	-		BWI76_RS20130	0.31	-3.0
4,217,909	+		BWI76_RS20130	0.63	-3.6
4,218,271	+		BWI76_RS20130	0.88	-4.4
4,218,731	+		BWI76_RS20135	0.18	-1.1
4,219,060	+		BWI76_RS20135	0.40	-4.3