Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19565

Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
4,089,782	+		BWI76_RS19560	0.14	-0.3
4,089,866	-		BWI76_RS19560	0.24	+0.6
4,089,985	-		BWI76_RS19560	0.38	+0.8
4,090,013	-		BWI76_RS19560	0.41	-1.1
4,090,071	-		BWI76_RS19560	0.48	+0.8
4,090,120	+		BWI76_RS19560	0.54	+0.7
4,090,156	-		BWI76_RS19560	0.59	+0.1
4,090,224	-		BWI76_RS19560	0.67	+1.1
4,090,303	+		BWI76_RS19560	0.76	-0.9
4,090,432	-				-3.0
4,090,436	-				-2.2
4,090,596	-				-2.4
4,090,715	+				+0.2
4,090,723	-				+0.8
4,090,723	-				-3.5
4,090,733	+				+0.8
4,090,856	-		BWI76_RS19565	0.22	-0.3
4,090,858	+		BWI76_RS19565	0.22	+0.7
4,090,906	+		BWI76_RS19565	0.27	-2.0
4,091,197	+		BWI76_RS19565	0.58	-1.3
4,091,311	-		BWI76_RS19565	0.70	+0.0
4,091,436	+		BWI76_RS19565	0.83	-1.6
4,091,444	-		BWI76_RS19565	0.84	-1.6
4,091,636	+				+1.4
4,091,799	-				-0.6
4,091,872	-				-0.7
4,091,988	-		BWI76_RS19570	0.16	-0.7
4,091,990	-		BWI76_RS19570	0.16	-0.5
4,092,031	+		BWI76_RS19570	0.20	-0.5
4,092,062	-		BWI76_RS19570	0.23	+0.1
4,092,084	+		BWI76_RS19570	0.24	-1.1
4,092,087	-		BWI76_RS19570	0.25	-0.7