Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16605

Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
3,437,879	-		BWI76_RS16595	0.36	-0.1
3,437,913	+		BWI76_RS16595	0.42	+0.7
3,437,931	+		BWI76_RS16595	0.46	+0.9
3,438,022	+		BWI76_RS16595	0.63	+1.3
3,438,022	+		BWI76_RS16595	0.63	-1.1
3,438,091	+		BWI76_RS16595	0.77	-1.1
3,438,091	+		BWI76_RS16595	0.77	+0.9
3,438,099	-		BWI76_RS16595	0.78	+2.0
3,438,110	-		BWI76_RS16595	0.80	+1.2
3,438,191	+				+1.0
3,438,198	-				+0.5
3,438,212	+				+0.9
3,438,256	-				-0.0
3,438,266	-				+0.6
3,438,266	-				+0.3
3,438,302	+		BWI76_RS16600	0.17	-1.4
3,438,313	+		BWI76_RS16600	0.20	+0.4
3,438,349	-		BWI76_RS16600	0.28	-3.3
3,438,393	+		BWI76_RS16600	0.38	+1.9
3,438,400	-		BWI76_RS16600	0.39	-1.4
3,438,474	+		BWI76_RS16600	0.56	-3.1
3,438,493	+		BWI76_RS16600	0.60	+1.2
3,438,493	+		BWI76_RS16600	0.60	-0.8
3,438,493	+		BWI76_RS16600	0.60	+0.2
3,438,493	+		BWI76_RS16600	0.60	-3.6
3,438,494	+		BWI76_RS16600	0.60	+0.3
3,438,501	-		BWI76_RS16600	0.62	+0.3
3,438,536	+		BWI76_RS16600	0.70	+1.2
3,438,571	+				+0.2
3,438,571	+		BWI76_RS16600	0.78	-0.8
3,438,571	+		BWI76_RS16600	0.78	-1.8
3,438,571	+		BWI76_RS16600	0.78	-0.8
3,438,571	+		BWI76_RS16600	0.78	-1.8
3,438,578	+		BWI76_RS16600	0.79	+0.2
3,438,579	-		BWI76_RS16600	0.79	-1.4
3,438,579	-		BWI76_RS16600	0.79	-0.0
3,438,579	-		BWI76_RS16600	0.79	+0.8
3,438,579	-		BWI76_RS16600	0.79	+1.8
3,438,579	-		BWI76_RS16600	0.79	-0.4
3,438,579	-		BWI76_RS16600	0.79	+1.2
3,438,579	-		BWI76_RS16600	0.79	-0.4
3,438,579	-		BWI76_RS16600	0.79	-2.1
3,438,579	-		BWI76_RS16600	0.79	+1.5
3,438,579	-		BWI76_RS16600	0.79	+0.6
3,438,579	-		BWI76_RS16600	0.79	-3.3
3,438,579	-		BWI76_RS16600	0.79	+0.9
3,438,593	-		BWI76_RS16600	0.83	+0.2
3,438,668	-				+3.2
3,438,715	-				-0.1
3,438,720	+				-0.4
3,438,763	+		BWI76_RS16605	0.16	-0.8
3,438,768	+				+1.2
3,438,771	-				+0.2
3,438,771	-				+0.2
3,438,840	-		BWI76_RS16605	0.32	-1.4
3,438,853	-		BWI76_RS16605	0.34	-4.3
3,438,863	-		BWI76_RS16605	0.36	-2.1
3,438,870	-		BWI76_RS16605	0.38	-1.2
3,438,870	-		BWI76_RS16605	0.38	-1.4
3,438,870	-		BWI76_RS16605	0.38	+0.4
3,438,874	-		BWI76_RS16605	0.38	-3.6
3,438,885	-		BWI76_RS16605	0.41	-4.3
3,438,885	-		BWI76_RS16605	0.41	-0.8
3,438,885	-		BWI76_RS16605	0.41	-1.8
3,438,903	-		BWI76_RS16605	0.44	-2.5
3,438,943	-		BWI76_RS16605	0.52	+1.7
3,439,064	-		BWI76_RS16605	0.76	-2.4
3,439,147	+				-2.0
3,439,147	+				+0.2
3,439,147	+				-3.1
3,439,155	-				+0.7
3,439,155	-				+1.2
3,439,155	-				-0.8
3,439,155	-				+1.2
3,439,155	-				+0.4
3,439,155	-				-0.4
3,439,155	-				+0.2
3,439,182	+				-0.4
3,439,190	-				-1.6
3,439,221	+				+0.2
3,439,258	+				+0.2
3,439,282	-				-1.6
3,439,292	+				-0.6
3,439,336	-				-2.0
3,439,340	-				+2.2
3,439,347	-				-0.4
3,439,348	-				-4.2
3,439,349	-				-0.7
3,439,349	-				+0.3
3,439,374	+				-0.3
3,439,376	+				+0.4
3,439,387	+				-2.7
3,439,388	+				+0.7
3,439,410	-				-1.4
3,439,419	-				+0.2
3,439,434	+				+1.7
3,439,455	+				-2.6
3,439,458	-				+1.8
3,439,459	+				+1.2
3,439,463	-				-0.8
3,439,463	-				-0.4
3,439,487	+				-0.8
3,439,487	+				+0.8
3,439,564	+		BWI76_RS16610	0.45	-0.2
3,439,565	+		BWI76_RS16610	0.46	+0.8
3,439,586	+		BWI76_RS16610	0.58	+0.4
3,439,606	+		BWI76_RS16610	0.70	+0.6
3,439,606	+		BWI76_RS16610	0.70	+0.3
3,439,614	-		BWI76_RS16610	0.74	-0.8
3,439,639	+		BWI76_RS16610	0.89	-0.1
3,439,797	-				-0.5
3,439,941	+				+0.1
3,439,941	+				-2.1
3,440,070	-		BWI76_RS16615	0.14	-1.8