Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15045
Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x |
|---|---|---|---|---|---|
| remove | |||||
| 3,148,203 | + | BWI76_RS15040 | 0.26 | +1.3 | |
| 3,148,263 | + | BWI76_RS15040 | 0.31 | +0.8 | |
| 3,148,302 | - | BWI76_RS15040 | 0.35 | +1.2 | |
| 3,148,304 | + | BWI76_RS15040 | 0.35 | +1.3 | |
| 3,148,304 | + | BWI76_RS15040 | 0.35 | -1.3 | |
| 3,148,317 | + | BWI76_RS15040 | 0.36 | -2.1 | |
| 3,148,389 | - | BWI76_RS15040 | 0.43 | -3.7 | |
| 3,148,478 | - | BWI76_RS15040 | 0.52 | -0.8 | |
| 3,148,509 | - | BWI76_RS15040 | 0.55 | +0.2 | |
| 3,148,603 | + | BWI76_RS15040 | 0.64 | +0.3 | |
| 3,149,322 | - | BWI76_RS15045 | 0.30 | +1.3 | |
| 3,149,332 | - | BWI76_RS15045 | 0.31 | +0.4 | |
| 3,149,625 | + | BWI76_RS15045 | 0.66 | +1.1 | |
| 3,149,848 | - | -2.6 | |||
| 3,149,989 | - | -2.3 | |||
| 3,150,125 | - | BWI76_RS15050 | 0.20 | +0.7 | |
| 3,150,239 | - | BWI76_RS15050 | 0.29 | -1.9 | |
| 3,150,461 | + | BWI76_RS15050 | 0.48 | +1.0 |
Or see this region's nucleotide sequence