Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14865
Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x |
---|---|---|---|---|---|
remove | |||||
3,113,297 | - | BWI76_RS14860 | 0.38 | +1.1 | |
3,113,344 | - | BWI76_RS14860 | 0.41 | -3.2 | |
3,113,551 | + | BWI76_RS14860 | 0.54 | +0.4 | |
3,113,602 | - | BWI76_RS14860 | 0.57 | -0.3 | |
3,113,870 | - | BWI76_RS14860 | 0.75 | -0.8 | |
3,113,915 | + | BWI76_RS14860 | 0.78 | -2.7 | |
3,114,106 | - | +1.2 | |||
3,114,353 | + | BWI76_RS14865 | 0.11 | -3.8 | |
3,114,684 | - | BWI76_RS14865 | 0.43 | -0.7 | |
3,114,741 | + | BWI76_RS14865 | 0.49 | +1.3 | |
3,115,035 | - | BWI76_RS14865 | 0.78 | -0.6 | |
3,115,348 | + | +1.1 | |||
3,115,473 | - | +0.7 | |||
3,115,540 | + | BWI76_RS14870 | 0.15 | +0.4 | |
3,116,071 | - | BWI76_RS14870 | 0.54 | -3.7 |
Or see this region's nucleotide sequence