Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13685
Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x |
---|---|---|---|---|---|
remove | |||||
2,855,146 | + | BWI76_RS13680 | 0.45 | +0.2 | |
2,855,196 | - | BWI76_RS13680 | 0.48 | +2.0 | |
2,855,310 | + | BWI76_RS13680 | 0.56 | -2.8 | |
2,855,815 | + | BWI76_RS13680 | 0.89 | +1.2 | |
2,856,585 | + | BWI76_RS13685 | 0.76 | +1.1 | |
2,856,657 | - | BWI76_RS13685 | 0.85 | +1.0 | |
2,857,252 | + | -1.1 | |||
2,857,306 | + | BWI76_RS13690 | 0.24 | -0.2 | |
2,857,314 | - | BWI76_RS13690 | 0.25 | +0.7 | |
2,857,323 | + | BWI76_RS13690 | 0.26 | -4.0 | |
2,857,379 | + | BWI76_RS13690 | 0.31 | -0.2 | |
2,857,387 | - | BWI76_RS13690 | 0.31 | +0.3 | |
2,857,387 | - | BWI76_RS13690 | 0.31 | +1.2 | |
2,857,412 | + | BWI76_RS13690 | 0.34 | +1.3 | |
2,857,457 | + | BWI76_RS13690 | 0.38 | -0.8 | |
2,857,721 | + | +1.2 | |||
2,857,729 | - | BWI76_RS13690 | 0.62 | +1.3 |
Or see this region's nucleotide sequence