Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13275
Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x |
---|---|---|---|---|---|
remove | |||||
2,767,655 | + | BWI76_RS13270 | 0.60 | -0.4 | |
2,767,984 | - | BWI76_RS13270 | 0.73 | -0.3 | |
2,768,034 | - | BWI76_RS13270 | 0.76 | -0.4 | |
2,768,044 | - | BWI76_RS13270 | 0.76 | +0.9 | |
2,768,068 | - | BWI76_RS13270 | 0.77 | -2.7 | |
2,768,281 | + | BWI76_RS13270 | 0.86 | -3.3 | |
2,768,573 | - | -0.8 | |||
2,768,763 | + | BWI76_RS13275 | 0.60 | +0.4 | |
2,769,007 | - | BWI76_RS13280 | 0.11 | -2.5 | |
2,769,080 | - | BWI76_RS13280 | 0.19 | +2.3 | |
2,769,505 | - | BWI76_RS13280 | 0.65 | -2.8 | |
2,769,507 | - | BWI76_RS13280 | 0.65 | +2.0 | |
2,769,574 | - | BWI76_RS13280 | 0.72 | +2.7 | |
2,769,577 | - | BWI76_RS13280 | 0.73 | +2.0 | |
2,769,700 | + | BWI76_RS13280 | 0.86 | +2.1 | |
2,769,728 | - | BWI76_RS13280 | 0.89 | +0.8 | |
2,769,757 | - | +0.3 | |||
2,769,783 | - | -0.4 | |||
2,769,794 | + | +3.1 |
Or see this region's nucleotide sequence