Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08455

Experiment: RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x
1,789,139	+		BWI76_RS08450	0.43	+0.3
1,789,254	+				+0.2
1,789,254	+		BWI76_RS08450	0.50	+0.3
1,789,496	-		BWI76_RS08450	0.64	-0.4
1,789,680	+		BWI76_RS08450	0.75	+0.3
1,790,600	+		BWI76_RS08455	0.50	-1.6
1,790,609	-		BWI76_RS08455	0.51	-1.1
1,790,811	+		BWI76_RS08455	0.71	-3.6
1,790,930	-		BWI76_RS08455	0.83	-2.4
1,790,942	+		BWI76_RS08455	0.84	-2.4
1,791,044	+				-1.5
1,791,141	-				-1.6
1,791,150	-				+1.7
1,791,208	+				-1.2
1,791,514	+		BWI76_RS08460	0.26	+0.9
1,791,572	+		BWI76_RS08460	0.30	+0.3
1,791,572	+		BWI76_RS08460	0.30	-0.9
1,791,580	-		BWI76_RS08460	0.31	+1.0
1,791,730	-				-0.4
1,791,947	+		BWI76_RS08460	0.59	-0.5
1,791,947	+		BWI76_RS08460	0.59	-0.1
1,791,959	+		BWI76_RS08460	0.60	+1.2
1,792,049	+		BWI76_RS08460	0.67	-1.8
1,792,077	+		BWI76_RS08460	0.69	-3.6
1,792,099	-		BWI76_RS08460	0.71	+1.5