Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3202

Experiment: BHIS with Simvastatin 30 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Simvastatin 30 uM
4,092,213	+		BT3201	0.69	+0.2
4,092,266	-		BT3201	0.71	+0.6
4,092,266	-		BT3201	0.71	+0.2
4,092,356	-		BT3201	0.74	+0.2
4,092,362	+		BT3201	0.74	-2.6
4,092,363	-		BT3201	0.74	-0.5
4,092,363	-		BT3201	0.74	-0.8
4,092,366	+		BT3201	0.74	-1.4
4,092,366	+		BT3201	0.74	-2.1
4,092,367	-		BT3201	0.74	-0.2
4,092,367	-		BT3201	0.74	+0.2
4,092,369	-				-2.1
4,092,369	-		BT3201	0.74	-0.8
4,092,369	-		BT3201	0.74	-1.8
4,092,369	-		BT3201	0.74	-1.8
4,092,457	-		BT3201	0.77	-4.3
4,092,457	-		BT3201	0.77	-1.4
4,092,458	+		BT3201	0.77	+0.9
4,092,458	+		BT3201	0.77	+0.5
4,092,462	-		BT3201	0.77	-1.2
4,092,465	+		BT3201	0.77	-1.8
4,092,466	-		BT3201	0.77	-4.3
4,092,467	+		BT3201	0.77	-1.4
4,092,468	-		BT3201	0.77	+0.4
4,092,532	-		BT3201	0.79	-0.7
4,092,552	+		BT3201	0.80	-0.8
4,092,554	+		BT3201	0.80	-0.7
4,092,554	+		BT3201	0.80	-0.0
4,092,575	+		BT3201	0.81	-2.1
4,092,576	-		BT3201	0.81	-2.1
4,092,581	-		BT3201	0.81	+0.2
4,092,634	+		BT3201	0.83	-0.4
4,092,634	+		BT3201	0.83	-0.7
4,092,635	-		BT3201	0.83	+0.2
4,092,636	+		BT3201	0.83	-2.0
4,092,636	+		BT3201	0.83	+0.2
4,092,636	+		BT3201	0.83	-2.1
4,092,637	-		BT3201	0.83	-0.4
4,092,637	-		BT3201	0.83	-1.4
4,092,643	-		BT3201	0.83	-2.1
4,092,643	-		BT3201	0.83	-2.6
4,092,643	-		BT3201	0.83	+0.5
4,092,645	-		BT3201	0.83	-0.8
4,092,656	-		BT3201	0.83	+0.2
4,092,661	-		BT3201	0.83	-1.4
4,092,662	+		BT3201	0.83	+0.2
4,092,662	+		BT3201	0.83	+1.2
4,092,662	+		BT3201	0.83	+0.4
4,092,663	-		BT3201	0.84	-1.1
4,092,678	-		BT3201	0.84	-2.9
4,092,693	+		BT3201	0.84	+1.2
4,092,694	-		BT3201	0.84	+0.3
4,092,743	+		BT3201	0.86	-1.0
4,092,743	+		BT3201	0.86	-1.5
4,092,745	+		BT3201	0.86	-0.8
4,092,746	-		BT3201	0.86	-1.4
4,092,775	+		BT3201	0.87	-3.3
4,092,776	-		BT3201	0.87	-0.5
4,092,776	-		BT3201	0.87	-3.1
4,092,776	-		BT3201	0.87	+0.6
4,092,806	-		BT3201	0.88	-1.3
4,092,886	-				-2.4
4,092,929	+				+0.0
4,092,930	-				-1.5
4,092,930	-				-2.1
4,092,930	-				-3.0
4,092,952	-				-2.1
4,092,954	-				-1.0
4,092,958	-				+0.2
4,093,023	-				-2.4
4,093,027	-				-2.1
4,093,057	-				-0.3
4,093,059	-				-1.8
4,093,062	-				-1.1
4,093,084	-				-4.1
4,093,113	+				+0.6
4,093,114	-				-0.8
4,093,119	+				-1.4
4,093,122	+				+0.8
4,093,177	+				+0.4
4,093,200	+				-1.4
4,093,270	+				-3.6
4,093,271	-				+1.2
4,093,271	-				-0.6
4,093,307	-				-1.4
4,093,327	+				-0.2
4,093,327	+				-1.4
4,093,328	-				+0.2
4,093,328	-				+0.2
4,093,343	-				-3.0
4,093,393	-				-0.8
4,093,395	-				-0.3
4,093,395	-				+0.2
4,093,395	-				-1.0
4,093,395	-				-1.4
4,093,396	+				+1.5
4,093,405	+				+0.2
4,093,416	-				-2.8
4,093,499	-				-1.8
4,093,593	-		BT3202	0.10	-0.8
4,093,631	-		BT3202	0.11	-0.7
4,093,684	+		BT3202	0.13	-2.6
4,093,697	-		BT3202	0.13	-1.4
4,093,801	-		BT3202	0.16	-1.8
4,093,805	+		BT3202	0.16	+0.2
4,093,806	-		BT3202	0.16	+0.9
4,093,825	-		BT3202	0.16	-2.5
4,093,949	-		BT3202	0.19	-2.8
4,093,973	-		BT3202	0.20	-3.8
4,093,973	-		BT3202	0.20	+0.2
4,093,984	+		BT3202	0.20	-1.8
4,093,988	+		BT3202	0.20	-1.4
4,093,988	+		BT3202	0.20	-1.6
4,093,989	-		BT3202	0.20	+0.3
4,093,989	-		BT3202	0.20	-1.5
4,093,991	+		BT3202	0.20	-1.3
4,094,042	-		BT3202	0.22	-3.2
4,094,056	-		BT3202	0.22	-0.3
4,094,058	+		BT3202	0.22	-1.4
4,094,059	-		BT3202	0.22	-1.8
4,094,059	-		BT3202	0.22	+0.2
4,094,073	-		BT3202	0.22	+0.2
4,094,089	+		BT3202	0.23	-1.4
4,094,089	+		BT3202	0.23	-3.7
4,094,148	+		BT3202	0.24	-1.8
4,094,176	+		BT3202	0.25	-0.4
4,094,180	+		BT3202	0.25	+2.9
4,094,268	+		BT3202	0.27	-0.8
4,094,330	-		BT3202	0.29	-2.6
4,094,334	+		BT3202	0.29	-0.5
4,094,334	+		BT3202	0.29	-1.9
4,094,384	-		BT3202	0.30	-0.3
4,094,386	+		BT3202	0.30	+0.2
4,094,425	+		BT3202	0.31	+0.4
4,094,547	-		BT3202	0.34	-2.0
4,094,547	-		BT3202	0.34	-3.2
4,094,547	-		BT3202	0.34	-0.7
4,094,547	-		BT3202	0.34	-1.8
4,094,549	+		BT3202	0.34	-0.8
4,094,616	+		BT3202	0.36	-0.3
4,094,617	-		BT3202	0.36	-1.4
4,094,620	+		BT3202	0.36	-0.3
4,094,621	-		BT3202	0.36	-0.8
4,094,648	+		BT3202	0.37	+0.8
4,094,655	-		BT3202	0.37	-0.8
4,094,663	-		BT3202	0.37	-1.4
4,094,721	-		BT3202	0.38	-2.6
4,094,723	+		BT3202	0.38	+0.2
4,094,724	-		BT3202	0.39	-1.4
4,094,724	-		BT3202	0.39	-2.4
4,094,729	+		BT3202	0.39	-0.8
4,094,750	-		BT3202	0.39	+0.2
4,094,824	-		BT3202	0.41	-1.4
4,094,824	-		BT3202	0.41	-3.2
4,094,824	-		BT3202	0.41	+0.2
4,094,838	+		BT3202	0.41	-2.2
4,094,843	-		BT3202	0.41	+0.2
4,094,843	-		BT3202	0.41	+0.7
4,094,866	+		BT3202	0.42	-1.2
4,094,909	+		BT3202	0.43	-2.2
4,094,910	-		BT3202	0.43	-1.4
4,094,922	-		BT3202	0.43	-1.4
4,094,957	-		BT3202	0.44	-1.2
4,095,014	+		BT3202	0.46	-1.3
4,095,022	+		BT3202	0.46	-0.8
4,095,022	+				-1.8
4,095,023	-		BT3202	0.46	-3.2
4,095,026	+				-2.2
4,095,034	+		BT3202	0.46	-0.7
4,095,035	-		BT3202	0.46	-0.8
4,095,035	-		BT3202	0.46	-1.8
4,095,038	+		BT3202	0.46	-2.6
4,095,071	-		BT3202	0.47	-1.8
4,095,074	+		BT3202	0.47	-0.8
4,095,074	+		BT3202	0.47	+0.2
4,095,077	-		BT3202	0.47	+0.2
4,095,140	-		BT3202	0.49	-1.4
4,095,149	-		BT3202	0.49	-1.5
4,095,158	+		BT3202	0.49	-0.8
4,095,172	+		BT3202	0.50	+0.6
4,095,218	+		BT3202	0.51	-1.5
4,095,219	-		BT3202	0.51	-0.8
4,095,221	+		BT3202	0.51	-1.1
4,095,371	+		BT3202	0.55	-1.8
4,095,371	+		BT3202	0.55	-1.4
4,095,374	-		BT3202	0.55	-2.4
4,095,377	+		BT3202	0.55	-2.6
4,095,378	-		BT3202	0.55	-0.7
4,095,384	-		BT3202	0.55	-1.8
4,095,448	+		BT3202	0.57	-1.3
4,095,461	+		BT3202	0.57	-0.8
4,095,522	-		BT3202	0.58	-1.9
4,095,533	-		BT3202	0.59	-1.8
4,095,554	-		BT3202	0.59	-0.1
4,095,579	+		BT3202	0.60	-2.2
4,095,580	-		BT3202	0.60	-3.3
4,095,587	+		BT3202	0.60	-3.8
4,095,587	+		BT3202	0.60	-0.8
4,095,588	-		BT3202	0.60	-1.4
4,095,614	+		BT3202	0.61	+0.2
4,095,615	-		BT3202	0.61	-0.9
4,095,622	+		BT3202	0.61	+0.5
4,095,625	+		BT3202	0.61	+0.2
4,095,662	-		BT3202	0.62	-1.4
4,095,687	-		BT3202	0.63	-0.4
4,095,692	-		BT3202	0.63	+0.2
4,095,720	-		BT3202	0.63	-1.4
4,095,771	+		BT3202	0.65	-2.2
4,095,794	-		BT3202	0.65	-1.4
4,095,797	-				-2.4
4,095,849	+		BT3202	0.67	-1.4
4,095,869	+		BT3202	0.67	-1.8
4,095,869	+		BT3202	0.67	-1.8
4,095,869	+		BT3202	0.67	-1.4
4,095,869	+		BT3202	0.67	-0.8
4,095,870	-		BT3202	0.67	+0.2
4,095,901	+		BT3202	0.68	-2.9
4,095,969	-		BT3202	0.70	-1.2
4,096,018	-		BT3202	0.71	-1.8
4,096,034	-		BT3202	0.71	-3.2
4,096,034	-		BT3202	0.71	+0.2
4,096,060	-		BT3202	0.72	-0.5
4,096,444	+		BT3202	0.81	+1.8
4,096,444	+		BT3202	0.81	+0.2
4,096,466	-		BT3202	0.82	-1.8
4,096,500	-		BT3202	0.83	-1.3
4,096,502	+		BT3202	0.83	-1.4
4,096,502	+		BT3202	0.83	+0.2
4,096,503	-		BT3202	0.83	+0.2
4,096,523	+		BT3202	0.83	-2.4
4,096,567	+		BT3202	0.84	-1.4
4,096,567	+		BT3202	0.84	-2.6
4,096,567	+		BT3202	0.84	-0.4
4,096,577	-		BT3202	0.85	-1.6
4,096,588	+		BT3202	0.85	-1.1
4,096,588	+		BT3202	0.85	-0.9
4,096,589	-		BT3202	0.85	-0.8
4,096,613	+		BT3202	0.86	-3.0
4,096,613	+		BT3202	0.86	-0.7
4,096,614	-		BT3202	0.86	-2.2
4,096,614	-		BT3202	0.86	+0.3
4,096,619	+		BT3202	0.86	-0.8
4,096,619	+		BT3202	0.86	+0.6
4,096,619	+		BT3202	0.86	-1.2
4,096,621	+		BT3202	0.86	-1.4
4,096,621	+		BT3202	0.86	-2.2
4,096,635	+		BT3202	0.86	-1.4
4,096,656	+		BT3202	0.87	-1.1
4,096,657	-		BT3202	0.87	-1.5
4,096,666	-		BT3202	0.87	-0.8
4,096,682	+		BT3202	0.87	-1.4
4,096,683	-		BT3202	0.87	-2.7
4,096,684	+		BT3202	0.87	-2.2
4,096,685	-		BT3202	0.87	+0.2
4,096,688	-		BT3202	0.87	-2.6
4,096,751	-		BT3202	0.89	-3.0
4,096,759	-		BT3202	0.89	-1.5
4,096,797	-				+0.2
4,096,798	+				-2.4
4,096,832	+				-0.7
4,096,833	-				-1.4
4,096,864	+				-0.1
4,096,873	-				+1.2
4,096,894	-				-0.8
4,096,894	-				-2.2
4,096,927	+				+0.2
4,096,928	-				-1.4
4,096,953	+				-2.2
4,096,953	+				-2.6
4,096,958	-				-1.8
4,097,069	-				+0.2
4,097,101	-				-0.3
4,097,114	-				+0.7
4,097,150	+				-0.6
4,097,165	-				-1.4
4,097,172	+				-3.7
4,097,225	-		BT3203	0.13	-0.8
4,097,227	+		BT3203	0.13	-1.8
4,097,270	+		BT3203	0.21	-0.6
4,097,274	-		BT3203	0.21	-0.7
4,097,318	+		BT3203	0.29	-1.4
4,097,330	+		BT3203	0.31	-0.4
4,097,331	-		BT3203	0.31	+0.2
4,097,353	+		BT3203	0.35	-1.0
4,097,354	-		BT3203	0.35	-1.9
4,097,373	-		BT3203	0.39	-0.8
4,097,373	-		BT3203	0.39	+0.1
4,097,382	-		BT3203	0.40	-3.4
4,097,454	+		BT3203	0.53	-0.2
4,097,454	+		BT3203	0.53	-2.5
4,097,455	-		BT3203	0.53	-0.3
4,097,481	-		BT3203	0.58	-1.4
4,097,481	-		BT3203	0.58	-3.5
4,097,482	+		BT3203	0.58	-1.2
4,097,522	-		BT3203	0.65	-2.4
4,097,522	-		BT3203	0.65	-1.8
4,097,599	+		BT3203	0.78	-1.9
4,097,618	-		BT3203	0.82	+1.9
4,097,618	-		BT3203	0.82	-1.8
4,097,622	+		BT3203	0.82	-0.8
4,097,622	+		BT3203	0.82	-2.0
4,097,623	-		BT3203	0.82	-1.4
4,097,674	+				-2.2
4,097,695	+				+0.2
4,097,695	+				-0.5
4,097,696	-				-1.8
4,097,703	+				-1.8
4,097,703	+				-1.6
4,097,703	+				-3.1
4,097,708	-				+0.2
4,097,722	-				-1.3
4,097,737	-				-1.9
4,097,744	+				-0.2
4,097,747	+				-3.3
4,097,775	-				-2.2
4,097,816	-				+0.2
4,097,816	-				-2.1
4,097,855	-				-1.4
4,097,856	+				-3.5
4,097,866	-				-0.9