Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26165

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
5,406,362	+		BWI76_RS26160	0.54	+2.2
5,406,370	-		BWI76_RS26160	0.54	+0.4
5,406,370	-		BWI76_RS26160	0.54	+0.7
5,406,377	+		BWI76_RS26160	0.55	+0.3
5,406,546	+		BWI76_RS26160	0.63	-0.4
5,406,561	+		BWI76_RS26160	0.63	-0.2
5,406,644	+		BWI76_RS26160	0.67	-0.9
5,406,719	-		BWI76_RS26160	0.71	+0.1
5,406,858	-		BWI76_RS26160	0.78	+0.2
5,406,869	+		BWI76_RS26160	0.78	-0.2
5,406,877	-		BWI76_RS26160	0.79	+0.2
5,407,250	+				-0.5
5,407,323	+				+0.1
5,407,329	-				-0.2
5,407,389	+				-0.8
5,407,433	+				+0.1
5,407,619	-		BWI76_RS26165	0.12	+0.5
5,407,657	-		BWI76_RS26165	0.13	+2.2
5,407,835	-		BWI76_RS26165	0.21	-0.3
5,407,854	+				-1.0
5,408,072	-		BWI76_RS26165	0.31	+0.7
5,408,092	-		BWI76_RS26165	0.32	+0.2
5,408,093	+		BWI76_RS26165	0.32	+1.6
5,408,223	-		BWI76_RS26165	0.37	+0.6
5,408,223	-		BWI76_RS26165	0.37	+0.9
5,408,340	+		BWI76_RS26165	0.42	+1.2
5,408,410	+		BWI76_RS26165	0.45	-0.2
5,408,453	+		BWI76_RS26165	0.47	+0.5
5,408,498	+		BWI76_RS26165	0.49	+0.8
5,408,651	+		BWI76_RS26165	0.55	+0.3
5,408,835	+		BWI76_RS26165	0.63	+0.7
5,408,860	+		BWI76_RS26165	0.64	-0.2
5,408,875	+		BWI76_RS26165	0.64	+0.3
5,409,037	+		BWI76_RS26165	0.71	-0.1
5,409,180	-		BWI76_RS26165	0.77	+0.4
5,409,238	-		BWI76_RS26165	0.80	+0.2
5,409,284	-		BWI76_RS26165	0.81	+0.5
5,409,392	+		BWI76_RS26165	0.86	-0.2
5,409,400	-		BWI76_RS26165	0.86	+0.2
5,409,424	+		BWI76_RS26165	0.87	+0.8
5,409,441	-		BWI76_RS26165	0.88	-0.6
5,409,469	+		BWI76_RS26165	0.89	+0.1
5,409,632	-				+0.4
5,409,642	-				+0.2
5,409,698	-				-1.4
5,409,758	+				+1.0
5,409,797	+				+0.2
5,409,804	-				-0.3
5,409,826	-				-0.0
5,409,840	+				-0.7
5,409,855	+				-1.1
5,409,863	-				-0.3
5,409,863	-				-0.1
5,409,917	-				+1.6
5,409,930	-				+1.4
5,409,931	-				+0.5
5,409,931	-				+0.7
5,409,956	+				-2.1
5,409,956	-				+1.2
5,410,035	-				-1.0
5,410,159	-				-0.1
5,410,159	-				-3.3
5,410,207	-				-0.1
5,410,207	-				-0.6
5,410,217	+				-0.6
5,410,269	+				+0.2
5,410,322	+				+0.1
5,410,322	+				-0.3
5,410,322	+				-0.2
5,410,322	+				+0.9
5,410,327	+				-0.4
5,410,330	-				-0.1
5,410,345	-				+0.1
5,410,347	+				-0.9
5,410,366	-				+2.6
5,410,366	-				+0.6
5,410,370	-				-0.9
5,410,371	+				-2.0
5,410,372	+				+0.3
5,410,381	+				+0.5
5,410,381	+				-0.8
5,410,381	+				+0.6
5,410,381	+				-2.4
5,410,381	+				+0.6
5,410,381	+				-0.4
5,410,381	+				-0.8
5,410,381	+				+0.6
5,410,381	+				+0.6
5,410,381	+				-0.5
5,410,381	+				+0.2
5,410,381	+				+0.2
5,410,381	+				+0.1
5,410,381	+				-0.4
5,410,381	+				+0.2
5,410,381	+				+0.4
5,410,381	+				-1.4
5,410,381	+				-0.3
5,410,381	+				-0.5
5,410,381	+				+0.2
5,410,381	+				-0.1
5,410,381	+				-0.7
5,410,381	+				+0.3
5,410,381	+				+1.0
5,410,381	+				-0.1
5,410,381	+				-0.1
5,410,381	+				+0.7
5,410,381	+				+0.4
5,410,381	+				-0.4
5,410,381	+				-1.4
5,410,381	+				-0.2
5,410,381	+				-0.2
5,410,381	+				-2.0
5,410,381	+				-0.4
5,410,381	+				-1.1
5,410,381	+				-1.1
5,410,381	+				-0.5
5,410,381	+				+0.2
5,410,381	+				-0.4
5,410,389	-				+1.0
5,410,389	-				+0.6
5,410,389	-				-0.4
5,410,389	-				-0.3
5,410,389	-				-1.2
5,410,389	-				+0.6
5,410,389	-				+0.8
5,410,389	-				-1.5
5,410,389	-				+0.0
5,410,389	-				+0.6
5,410,389	-				+0.4
5,410,389	-				-0.4
5,410,389	-				+1.0
5,410,389	-				+0.0
5,410,389	-				+0.5
5,410,389	-				+0.6
5,410,389	-				+1.4
5,410,389	-				-0.4
5,410,389	-				+1.0
5,410,389	-				-0.2
5,410,389	-				+0.1
5,410,389	-				-0.1
5,410,389	-				-1.7
5,410,389	-				+0.5
5,410,389	-				+0.3
5,410,389	-				-0.4
5,410,389	-				-0.8
5,410,389	-				-1.4
5,410,389	-				-0.3
5,410,389	-				+0.6
5,410,389	-				+0.2
5,410,389	-				-0.2
5,410,389	-				-0.9
5,410,389	-				-0.6
5,410,389	-				+0.1
5,410,389	-				-2.2
5,410,389	-				+0.0
5,410,389	-				-0.1
5,410,389	-				-1.0
5,410,389	-				-0.5
5,410,389	-				-0.8
5,410,389	-				+0.8
5,410,389	-				+1.9
5,410,390	+				+0.2
5,410,390	+				+1.6
5,410,390	+				+0.2
5,410,390	+				+0.3
5,410,391	+				+0.5
5,410,391	+				-0.4
5,410,391	+				-0.0
5,410,391	+				-1.1
5,410,391	+				-2.0
5,410,399	-				+1.1
5,410,410	-				-0.4
5,410,436	+				-1.5
5,410,452	+				-0.0
5,410,452	+				+0.7
5,410,460	-				+0.9
5,410,470	-				+0.9
5,410,475	+				-1.4
5,410,538	+				+0.7
5,410,545	+				-1.0
5,410,560	-				-0.5
5,410,596	-				-0.7