Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20390

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
4,266,788	+				+0.1
4,266,793	+				-1.2
4,266,921	+		BWI76_RS20385	0.21	-2.8
4,266,974	-		BWI76_RS20385	0.26	-0.1
4,267,035	-		BWI76_RS20385	0.32	-0.7
4,267,590	-		BWI76_RS20385	0.87	+0.5
4,267,854	-				+0.3
4,268,307	+		BWI76_RS20390	0.46	+1.8
4,268,380	+		BWI76_RS20390	0.53	+0.5
4,268,541	-		BWI76_RS20390	0.67	-0.6
4,268,862	-				-1.5
4,268,920	+				-0.1
4,268,928	-				-0.0
4,268,929	-				-0.6
4,269,020	+				+0.7
4,269,086	-				+0.7
4,269,090	+				-0.2
4,269,093	-				+1.4
4,269,145	-		BWI76_RS20395	0.12	+0.3
4,269,174	+		BWI76_RS20395	0.15	-0.4
4,269,236	+		BWI76_RS20395	0.22	+0.7
4,269,419	+		BWI76_RS20395	0.41	-0.7
4,269,516	-		BWI76_RS20395	0.51	-0.1
4,269,722	-		BWI76_RS20395	0.72	-2.2