Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19135

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
3,976,970	-				-1.4
3,977,038	-				-0.3
3,977,207	-		BWI76_RS19130	0.28	+0.4
3,977,207	-		BWI76_RS19130	0.28	+0.3
3,977,303	-		BWI76_RS19130	0.39	+1.1
3,977,330	+		BWI76_RS19130	0.42	-2.4
3,977,414	-		BWI76_RS19130	0.52	-1.4
3,977,460	-		BWI76_RS19130	0.57	-1.1
3,977,521	-		BWI76_RS19130	0.65	-0.7
3,977,624	-		BWI76_RS19130	0.77	-0.7
3,977,809	-				+0.2
3,977,854	+				+0.3
3,977,862	-				-1.9
3,978,346	-		BWI76_RS19135	0.29	+0.5
3,978,508	+		BWI76_RS19135	0.41	+0.3
3,978,717	+		BWI76_RS19135	0.56	+0.5
3,978,946	-		BWI76_RS19135	0.73	+0.6
3,978,993	-		BWI76_RS19135	0.77	+1.3
3,979,128	-		BWI76_RS19135	0.87	+0.1
3,979,230	-				+0.1
3,979,335	+				-0.3
3,979,363	+				-3.2
3,979,390	+				+0.3
3,979,391	-				-1.9
3,979,609	+		BWI76_RS19140	0.13	+0.2
3,979,718	-		BWI76_RS19140	0.22	-0.9
3,979,790	+		BWI76_RS19140	0.27	+0.2
3,979,890	-		BWI76_RS19140	0.35	-0.3
3,980,306	+		BWI76_RS19140	0.68	+0.4