Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18920

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
3,923,834	-		BWI76_RS18915	0.52	+0.4
3,924,034	-		BWI76_RS18915	0.76	-0.3
3,924,265	-				+0.1
3,924,265	-				-0.2
3,924,265	-				-0.3
3,924,568	+				+0.3
3,924,568	+				-2.8
3,924,578	+				+0.1
3,924,586	-				-5.1
3,924,586	-				-6.2
3,924,586	-				-4.8
3,924,698	-		BWI76_RS18920	0.11	-2.3
3,924,720	-		BWI76_RS18920	0.13	-4.0
3,924,867	-		BWI76_RS18920	0.30	-1.6
3,925,011	+		BWI76_RS18920	0.46	-1.9
3,925,425	-				-5.4
3,925,663	+				-6.5
3,925,795	+		BWI76_RS18925	0.20	-2.9
3,925,961	+				-1.4
3,925,969	-		BWI76_RS18925	0.33	-7.2
3,926,059	+		BWI76_RS18925	0.40	-5.6
3,926,096	+		BWI76_RS18925	0.43	-0.1