Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15985

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
3,314,645	+				-0.2
3,314,730	+				-0.4
3,314,782	-				-0.4
3,314,982	+		BWI76_RS15975	0.56	+0.4
3,315,261	-				-0.8
3,315,433	-		BWI76_RS15980	0.44	+0.5
3,315,584	+		BWI76_RS15985	0.11	+1.2
3,315,602	+		BWI76_RS15985	0.19	+2.2
3,315,610	-		BWI76_RS15985	0.22	+0.1
3,315,746	-		BWI76_RS15985	0.83	+0.1
3,315,951	+				-0.9
3,315,968	-				+0.1
3,316,079	-				-0.9
3,316,079	-				+0.6
3,316,364	+				-0.3
3,316,364	+				+1.1
3,316,372	-				+0.4
3,316,415	+				-0.3
3,316,540	-		BWI76_RS15990	0.22	-0.7
3,316,672	-		BWI76_RS15990	0.38	+1.2