Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06925

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
1,454,138	+		BWI76_RS06920	0.11	+0.0
1,454,138	+		BWI76_RS06920	0.11	+0.4
1,454,144	-		BWI76_RS06920	0.11	-0.6
1,454,146	-		BWI76_RS06920	0.11	-0.0
1,454,154	-		BWI76_RS06920	0.12	+0.4
1,454,434	-		BWI76_RS06920	0.43	-0.5
1,454,586	+		BWI76_RS06920	0.59	-1.3
1,454,594	-		BWI76_RS06920	0.60	+0.7
1,454,604	-		BWI76_RS06920	0.61	+0.6
1,454,604	-		BWI76_RS06920	0.61	+0.3
1,454,658	+		BWI76_RS06920	0.67	+0.1
1,454,666	-		BWI76_RS06920	0.68	-1.7
1,454,699	-		BWI76_RS06920	0.72	+1.8
1,454,821	+		BWI76_RS06920	0.85	-0.7
1,454,868	-				+0.1
1,454,868	-				+0.1
1,455,003	-				+0.0
1,455,008	+				-1.8
1,455,008	+				-0.7
1,455,063	+				-1.4
1,455,069	-				+1.2
1,455,152	-				+1.1
1,455,159	+				+1.0
1,455,159	+				-0.2
1,455,159	+				-1.8
1,455,159	+				+0.7
1,455,167	-		BWI76_RS06925	0.11	+1.2
1,455,167	-		BWI76_RS06925	0.11	+0.9
1,455,181	+		BWI76_RS06925	0.13	+1.5
1,455,189	-		BWI76_RS06925	0.14	+1.5
1,455,189	-		BWI76_RS06925	0.14	+2.0
1,455,189	-		BWI76_RS06925	0.14	-0.8
1,455,203	-		BWI76_RS06925	0.16	+0.9
1,455,215	-		BWI76_RS06925	0.18	+1.4
1,455,341	+		BWI76_RS06925	0.36	+1.1
1,455,341	+		BWI76_RS06925	0.36	+1.5
1,455,349	-		BWI76_RS06925	0.37	+1.0
1,455,368	-		BWI76_RS06925	0.40	+1.6
1,455,368	-		BWI76_RS06925	0.40	+1.0
1,455,375	+		BWI76_RS06925	0.41	+1.6
1,455,383	+		BWI76_RS06925	0.42	+1.5
1,455,383	+		BWI76_RS06925	0.42	+1.6
1,455,383	+				+0.8
1,455,391	-		BWI76_RS06925	0.43	+0.6
1,455,391	-		BWI76_RS06925	0.43	+2.4
1,455,470	-		BWI76_RS06925	0.55	+0.9
1,455,516	-		BWI76_RS06925	0.62	+1.3
1,455,670	+		BWI76_RS06925	0.84	+1.7
1,455,677	+		BWI76_RS06925	0.85	+2.4
1,455,677	+		BWI76_RS06925	0.85	+0.7
1,455,677	+		BWI76_RS06925	0.85	+0.8
1,455,685	-		BWI76_RS06925	0.87	+1.4
1,455,685	-		BWI76_RS06925	0.87	+0.8
1,455,715	-				+1.5
1,455,789	+				-0.2
1,455,907	-		BWI76_RS06930	0.19	+0.3
1,455,982	+		BWI76_RS06930	0.28	+1.0
1,456,071	+		BWI76_RS06930	0.39	+1.1
1,456,071	+		BWI76_RS06930	0.39	+1.4
1,456,071	+		BWI76_RS06930	0.39	+1.3
1,456,079	-		BWI76_RS06930	0.40	+0.8
1,456,085	-				-0.2
1,456,247	+		BWI76_RS06930	0.62	-1.2
1,456,444	-		BWI76_RS06930	0.87	+0.8
1,456,518	-				+1.1
1,456,760	-		BWI76_RS06935	0.14	-0.8