Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06130

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
1,287,253	+		BWI76_RS06125	0.35	+0.9
1,287,364	+		BWI76_RS06125	0.45	-0.8
1,287,477	+		BWI76_RS06125	0.56	+1.1
1,287,490	-		BWI76_RS06125	0.57	+0.0
1,287,506	+		BWI76_RS06125	0.58	-0.2
1,287,657	+		BWI76_RS06125	0.72	+0.1
1,287,705	+		BWI76_RS06125	0.77	+0.0
1,287,760	-		BWI76_RS06125	0.82	-1.0
1,287,766	-		BWI76_RS06125	0.82	-0.3
1,287,990	+				-0.0
1,288,076	+				-0.1
1,288,122	+				-0.7
1,288,615	+		BWI76_RS06130	0.81	+1.1
1,288,623	-		BWI76_RS06130	0.82	-0.1
1,288,768	-				-1.1
1,288,768	-				-1.0
1,289,043	+		BWI76_RS06135	0.10	+0.3
1,289,056	+		BWI76_RS06135	0.12	-0.2
1,289,240	+		BWI76_RS06135	0.27	+0.7
1,289,294	+		BWI76_RS06135	0.31	+0.7
1,289,345	+		BWI76_RS06135	0.36	-1.3
1,289,545	+		BWI76_RS06135	0.52	-0.6