Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00085

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
16,009	+		BWI76_RS00080	0.35	+0.5
16,225	+		BWI76_RS00080	0.59	+1.2
16,451	+		BWI76_RS00080	0.85	+0.1
16,461	+		BWI76_RS00080	0.86	-1.0
16,469	-		BWI76_RS00080	0.87	+0.7
16,514	-				-2.2
16,529	-				+0.6
16,601	-				-0.3
16,609	+				-0.7
16,616	+				-0.6
16,631	+		BWI76_RS00085	0.11	+0.2
16,631	+		BWI76_RS00085	0.11	+0.8
16,932	-		BWI76_RS00085	0.76	+0.5
17,020	-				-1.5
17,088	-				-0.4
17,176	+				+0.3
17,176	+				+0.4
17,176	+				+0.4
17,176	+				+0.6
17,184	-				+0.1
17,184	-				-0.1
17,214	-				-0.6
17,244	+				+0.4
17,252	-				-1.7
17,252	-				-0.5
17,498	-		BWI76_RS00090	0.24	-2.5
17,539	+		BWI76_RS00090	0.28	+0.5
17,546	+		BWI76_RS00090	0.28	+0.0
17,672	+		BWI76_RS00090	0.39	-0.8
17,683	+		BWI76_RS00090	0.40	+1.0
17,688	+		BWI76_RS00090	0.40	+0.7
17,696	-		BWI76_RS00090	0.41	+0.5
17,881	-		BWI76_RS00090	0.57	+0.2
17,963	+		BWI76_RS00090	0.64	-0.0
18,025	-		BWI76_RS00090	0.69	+0.1