Experiment: BHIS with Simvastatin 30 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0634 and BT0635 are separated by 209 nucleotides BT0635 and BT0636 are separated by 70 nucleotides
BT0634: BT0634 - Na+/H+ antiporter 1 (NCBI ptt file), at 781,573 to 782,892
BT0634
BT0635: BT0635 - putative transcriptional regulator (NCBI ptt file), at 783,102 to 783,479
BT0635
BT0636: BT0636 - putative transcriptional regulator (NCBI ptt file), at 783,550 to 785,196
BT0636
Position (kb) 783
784 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 782.106 kb on - strand, within BT0634 at 782.144 kb on - strand, within BT0634 at 782.209 kb on - strand, within BT0634 at 782.239 kb on - strand, within BT0634 at 782.325 kb on - strand, within BT0634 at 782.340 kb on + strand, within BT0634 at 782.349 kb on + strand, within BT0634 at 782.349 kb on + strand, within BT0634 at 782.350 kb on - strand, within BT0634 at 782.507 kb on - strand, within BT0634 at 782.654 kb on + strand, within BT0634 at 782.711 kb on + strand, within BT0634 at 782.712 kb on - strand, within BT0634 at 782.827 kb on - strand at 782.867 kb on + strand at 782.870 kb on + strand at 782.871 kb on - strand at 782.893 kb on + strand at 782.961 kb on + strand at 782.965 kb on - strand at 782.966 kb on + strand at 783.143 kb on + strand, within BT0635 at 783.222 kb on - strand, within BT0635 at 783.230 kb on + strand, within BT0635 at 783.363 kb on + strand, within BT0635 at 783.446 kb on - strand at 783.478 kb on - strand at 783.594 kb on - strand at 783.775 kb on - strand, within BT0636 at 783.823 kb on - strand, within BT0636 at 783.883 kb on - strand, within BT0636 at 783.884 kb on + strand, within BT0636 at 783.989 kb on + strand, within BT0636 at 783.990 kb on - strand, within BT0636 at 784.037 kb on - strand, within BT0636 at 784.274 kb on + strand, within BT0636 at 784.296 kb on + strand, within BT0636 at 784.306 kb on + strand, within BT0636 at 784.350 kb on + strand, within BT0636 at 784.435 kb on + strand, within BT0636
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Simvastatin 30 uM remove 782,106 - BT0634 0.40 -2.1 782,144 - BT0634 0.43 -0.1 782,209 - BT0634 0.48 -0.1 782,239 - BT0634 0.50 -2.1 782,325 - BT0634 0.57 -2.1 782,340 + BT0634 0.58 -1.1 782,349 + BT0634 0.59 +0.2 782,349 + BT0634 0.59 -0.0 782,350 - BT0634 0.59 -1.7 782,507 - BT0634 0.71 -2.4 782,654 + BT0634 0.82 -2.1 782,711 + BT0634 0.86 +0.6 782,712 - BT0634 0.86 -1.1 782,827 - -1.1 782,867 + +1.2 782,870 + -2.7 782,871 - -2.9 782,893 + -1.7 782,961 + -0.5 782,965 - +0.4 782,966 + -0.1 783,143 + BT0635 0.11 -3.7 783,222 - BT0635 0.32 -1.7 783,230 + BT0635 0.34 -0.1 783,363 + BT0635 0.69 -3.1 783,446 - -1.7 783,478 - -0.9 783,594 - +0.1 783,775 - BT0636 0.14 -1.1 783,823 - BT0636 0.17 -0.1 783,883 - BT0636 0.20 -1.1 783,884 + BT0636 0.20 -2.4 783,989 + BT0636 0.27 -0.5 783,990 - BT0636 0.27 -0.1 784,037 - BT0636 0.30 -0.1 784,274 + BT0636 0.44 -1.7 784,296 + BT0636 0.45 -0.1 784,306 + BT0636 0.46 -1.7 784,350 + BT0636 0.49 -0.1 784,435 + BT0636 0.54 +0.7
Or see this region's nucleotide sequence