Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29415

Experiment: Betaine (C)(N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with TAPS; with chloride
6,532,599	+		PFLU_RS29410	0.40	+1.1
6,532,641	-		PFLU_RS29410	0.42	+3.5
6,532,685	-		PFLU_RS29410	0.45	-0.3
6,532,685	-		PFLU_RS29410	0.45	+2.6
6,532,685	-		PFLU_RS29410	0.45	+0.7
6,532,685	-		PFLU_RS29410	0.45	-0.1
6,532,685	-		PFLU_RS29410	0.45	+2.4
6,532,685	-		PFLU_RS29410	0.45	-1.7
6,532,685	-		PFLU_RS29410	0.45	+2.9
6,532,685	-		PFLU_RS29410	0.45	-2.6
6,532,772	+		PFLU_RS29410	0.51	+0.9
6,532,772	+		PFLU_RS29410	0.51	+1.0
6,532,772	+		PFLU_RS29410	0.51	+1.6
6,532,772	+		PFLU_RS29410	0.51	-0.3
6,532,772	+		PFLU_RS29410	0.51	+1.9
6,532,772	+		PFLU_RS29410	0.51	+0.4
6,532,772	+		PFLU_RS29410	0.51	+2.9
6,532,773	-		PFLU_RS29410	0.51	+0.6
6,532,773	-		PFLU_RS29410	0.51	-1.3
6,532,773	-		PFLU_RS29410	0.51	+2.0
6,532,773	-		PFLU_RS29410	0.51	+0.9
6,532,773	-		PFLU_RS29410	0.51	-1.8
6,532,773	-		PFLU_RS29410	0.51	-1.5
6,532,790	+		PFLU_RS29410	0.52	-1.6
6,532,791	-		PFLU_RS29410	0.52	-1.6
6,532,791	-		PFLU_RS29410	0.52	+0.1
6,532,791	-		PFLU_RS29410	0.52	-1.6
6,532,791	-		PFLU_RS29410	0.52	+2.9
6,532,973	+		PFLU_RS29410	0.64	+2.3
6,532,973	+		PFLU_RS29410	0.64	+2.2
6,532,974	-		PFLU_RS29410	0.64	+1.3
6,532,974	-		PFLU_RS29410	0.64	-1.7
6,532,974	-		PFLU_RS29410	0.64	-1.1
6,533,003	+		PFLU_RS29410	0.66	+3.0
6,533,003	+		PFLU_RS29410	0.66	-0.5
6,533,003	+		PFLU_RS29410	0.66	-2.3
6,533,003	+		PFLU_RS29410	0.66	-0.4
6,533,003	+		PFLU_RS29410	0.66	-1.1
6,533,004	-		PFLU_RS29410	0.66	-1.3
6,533,004	-		PFLU_RS29410	0.66	+2.0
6,533,102	+		PFLU_RS29410	0.72	-1.5
6,533,138	+		PFLU_RS29410	0.74	-0.3
6,533,138	+		PFLU_RS29410	0.74	-1.5
6,533,138	+		PFLU_RS29410	0.74	-0.0
6,533,138	+		PFLU_RS29410	0.74	-0.5
6,533,138	+		PFLU_RS29410	0.74	-1.8
6,533,139	-		PFLU_RS29410	0.74	+0.6
6,533,139	-		PFLU_RS29410	0.74	-1.0
6,533,139	-		PFLU_RS29410	0.74	-1.4
6,533,139	-		PFLU_RS29410	0.74	-1.2
6,533,200	+		PFLU_RS29410	0.78	+1.0
6,533,200	+		PFLU_RS29410	0.78	-0.7
6,533,201	-		PFLU_RS29410	0.78	-2.3
6,533,201	-		PFLU_RS29410	0.78	-2.6
6,533,396	+				+0.1
6,533,396	+				+1.4
6,533,396	+				+0.4
6,533,396	+				+2.7
6,533,396	+				-1.2
6,533,396	+				+1.1
6,533,396	+				-1.1
6,533,396	+				-0.9
6,533,396	+				+1.5
6,533,396	+				+0.6
6,533,396	+				-2.2
6,533,396	+				+1.0
6,533,396	+				+0.7
6,533,396	+				+1.5
6,533,397	-				-1.5
6,533,397	-				-0.1
6,533,397	-				-1.3
6,533,397	-				+2.4
6,533,397	-				-1.3
6,533,397	-				+2.5
6,533,397	-				-0.8
6,533,397	-				+1.1
6,533,397	-				-3.1
6,533,540	+				-1.7
6,533,540	+				-2.4
6,533,541	-				-0.8
6,533,948	+		PFLU_RS29415	0.32	+2.5
6,533,948	+		PFLU_RS29415	0.32	-0.8
6,533,949	-		PFLU_RS29415	0.32	+1.4
6,534,053	+		PFLU_RS29415	0.42	+0.9
6,534,053	+		PFLU_RS29415	0.42	+0.9
6,534,053	+		PFLU_RS29415	0.42	+1.1
6,534,053	+		PFLU_RS29415	0.42	-1.8
6,534,053	+		PFLU_RS29415	0.42	+1.3
6,534,053	+		PFLU_RS29415	0.42	-0.3
6,534,053	+		PFLU_RS29415	0.42	-0.7
6,534,053	+		PFLU_RS29415	0.42	-1.7
6,534,053	+		PFLU_RS29415	0.42	+0.8
6,534,053	+		PFLU_RS29415	0.42	+2.2
6,534,053	+		PFLU_RS29415	0.42	+0.6
6,534,053	+		PFLU_RS29415	0.42	+0.6
6,534,054	-		PFLU_RS29415	0.42	-2.2
6,534,054	-		PFLU_RS29415	0.42	-1.3
6,534,054	-		PFLU_RS29415	0.42	-0.7
6,534,054	-		PFLU_RS29415	0.42	-1.5
6,534,054	-		PFLU_RS29415	0.42	+0.3
6,534,054	-		PFLU_RS29415	0.42	-1.6
6,534,054	-		PFLU_RS29415	0.42	+2.1
6,534,054	-		PFLU_RS29415	0.42	+1.3
6,534,054	-		PFLU_RS29415	0.42	-0.4
6,534,054	-		PFLU_RS29415	0.42	+0.2
6,534,054	-		PFLU_RS29415	0.42	-1.7
6,534,232	+		PFLU_RS29415	0.57	+0.0
6,534,233	-		PFLU_RS29415	0.57	+0.9
6,534,251	+		PFLU_RS29415	0.59	+0.8
6,534,251	+		PFLU_RS29415	0.59	-0.4
6,534,251	+		PFLU_RS29415	0.59	+1.5
6,534,251	+		PFLU_RS29415	0.59	+2.0
6,534,252	-		PFLU_RS29415	0.59	+0.6
6,534,252	-		PFLU_RS29415	0.59	-1.7
6,534,252	-		PFLU_RS29415	0.59	-2.9
6,534,252	-		PFLU_RS29415	0.59	+0.3
6,534,311	+		PFLU_RS29415	0.64	+3.2
6,534,311	+		PFLU_RS29415	0.64	+3.3
6,534,311	+		PFLU_RS29415	0.64	-1.6
6,534,312	-		PFLU_RS29415	0.64	+1.6
6,534,312	-		PFLU_RS29415	0.64	+1.9
6,534,312	-		PFLU_RS29415	0.64	+2.0
6,534,323	+		PFLU_RS29415	0.65	+1.0
6,534,323	+		PFLU_RS29415	0.65	+2.1
6,534,323	+		PFLU_RS29415	0.65	+1.8
6,534,323	+		PFLU_RS29415	0.65	+3.3
6,534,323	+		PFLU_RS29415	0.65	+0.3
6,534,323	+		PFLU_RS29415	0.65	-1.1
6,534,324	-		PFLU_RS29415	0.65	-0.5
6,534,324	-		PFLU_RS29415	0.65	-0.8
6,534,324	-		PFLU_RS29415	0.65	+1.9
6,534,370	+		PFLU_RS29415	0.69	-1.6
6,534,371	-		PFLU_RS29415	0.69	-0.9
6,534,371	-		PFLU_RS29415	0.69	-2.2
6,534,390	+		PFLU_RS29415	0.71	-1.9
6,534,390	+		PFLU_RS29415	0.71	-0.3
6,534,390	+		PFLU_RS29415	0.71	-0.9
6,534,391	-		PFLU_RS29415	0.71	+0.0
6,534,391	-		PFLU_RS29415	0.71	+1.9
6,534,391	-		PFLU_RS29415	0.71	+1.8
6,534,391	-		PFLU_RS29415	0.71	+0.3
6,534,391	-		PFLU_RS29415	0.71	+0.3
6,534,394	+		PFLU_RS29415	0.71	+0.1
6,534,394	+		PFLU_RS29415	0.71	-0.4
6,534,394	+		PFLU_RS29415	0.71	-1.0
6,534,394	+		PFLU_RS29415	0.71	-0.9
6,534,394	+		PFLU_RS29415	0.71	-0.3
6,534,394	+		PFLU_RS29415	0.71	+3.7
6,534,394	+		PFLU_RS29415	0.71	-2.1
6,534,394	+		PFLU_RS29415	0.71	-1.7
6,534,394	+		PFLU_RS29415	0.71	-1.4
6,534,394	+		PFLU_RS29415	0.71	-1.5
6,534,394	+		PFLU_RS29415	0.71	+0.4
6,534,394	+		PFLU_RS29415	0.71	+1.8
6,534,394	+		PFLU_RS29415	0.71	-0.7
6,534,394	+		PFLU_RS29415	0.71	+2.3
6,534,394	+		PFLU_RS29415	0.71	+0.1
6,534,394	+		PFLU_RS29415	0.71	+1.6
6,534,394	+		PFLU_RS29415	0.71	-0.3
6,534,394	+		PFLU_RS29415	0.71	-0.4
6,534,394	+		PFLU_RS29415	0.71	+0.7
6,534,394	+		PFLU_RS29415	0.71	-0.3
6,534,394	+		PFLU_RS29415	0.71	-1.7
6,534,394	+		PFLU_RS29415	0.71	+0.2
6,534,394	+		PFLU_RS29415	0.71	+0.6
6,534,394	+		PFLU_RS29415	0.71	+0.9
6,534,394	+		PFLU_RS29415	0.71	+0.1
6,534,394	+		PFLU_RS29415	0.71	+0.4
6,534,395	-		PFLU_RS29415	0.71	-0.8
6,534,395	-		PFLU_RS29415	0.71	-0.9
6,534,395	-		PFLU_RS29415	0.71	-2.9
6,534,395	-		PFLU_RS29415	0.71	-0.7
6,534,395	-		PFLU_RS29415	0.71	+0.6
6,534,395	-		PFLU_RS29415	0.71	+0.8
6,534,395	-		PFLU_RS29415	0.71	-0.3
6,534,395	-		PFLU_RS29415	0.71	-2.0
6,534,395	-		PFLU_RS29415	0.71	+1.7
6,534,395	-		PFLU_RS29415	0.71	-1.5
6,534,395	-		PFLU_RS29415	0.71	+3.2
6,534,395	-		PFLU_RS29415	0.71	-0.3
6,534,395	-		PFLU_RS29415	0.71	-2.2
6,534,446	+		PFLU_RS29415	0.76	+1.9
6,534,583	-		PFLU_RS29415	0.88	+2.8
6,534,704	+				-2.4
6,534,704	+				-1.7
6,534,704	+				-1.5
6,534,705	-				+2.2
6,534,705	-				-1.4
6,534,705	-				-2.2
6,534,766	+				-2.6
6,534,766	+				-2.3
6,534,766	+				-1.1
6,534,766	+				+0.0
6,534,766	+				+1.3
6,534,767	-				+0.6
6,534,767	-				-1.1
6,534,767	-				+0.4
6,534,767	-				-1.4
6,534,767	-				+0.9
6,534,767	-				-0.3
6,534,767	-				-2.1
6,534,814	+				-1.0
6,534,814	+				+2.3
6,534,814	+				-0.5
6,534,814	+				-1.3
6,534,814	+				+0.7
6,534,814	+				+1.4
6,534,814	+				-0.8
6,534,814	+				-2.2
6,534,814	+				+0.2
6,534,814	+				-0.9
6,534,814	+				+0.2
6,534,815	-				-2.8
6,534,815	-				-2.2
6,534,815	-				-1.2
6,534,815	-				-1.5
6,534,815	-				-0.7
6,534,815	-				-2.3
6,534,815	-				+1.3
6,534,833	+				+1.7
6,534,833	+				-1.2
6,534,833	+				+0.1
6,534,833	+				-0.0
6,534,833	+				-1.4
6,534,833	+				-1.5
6,534,833	+				-0.7
6,534,833	+				+1.3
6,534,833	+				-0.5
6,534,833	+				-1.6
6,534,833	+				+0.7
6,534,833	+				+1.8
6,534,833	+				-0.9
6,534,833	+				-1.2
6,534,834	-				-0.1
6,534,834	-				+1.5
6,534,834	-				-0.7
6,534,834	-				+2.4
6,534,834	-				+1.8
6,534,834	-				-2.0
6,534,834	-				+0.9
6,534,834	-				-1.9
6,534,834	-				-0.5
6,534,834	-				+1.3
6,534,834	-				+0.5
6,534,834	-				-2.3
6,534,834	-				-1.2
6,534,834	-				+0.1
6,534,834	-				+0.3
6,534,834	-				-0.4
6,534,834	-				-0.9
6,534,834	-				-1.8
6,534,834	-				+2.9
6,534,834	-				+0.3
6,534,834	-				-1.9
6,534,834	-				+0.4
6,534,834	-				+1.4
6,534,834	-				-1.0
6,534,843	+				-1.0
6,534,879	+				+1.2
6,534,903	-				+0.1
6,534,903	-				+0.8
6,534,903	-				+2.9
6,534,903	-				-1.3
6,534,903	-				+0.0
6,534,935	+				-0.4
6,534,935	+				-0.4
6,534,935	+				-1.2
6,534,935	+				+2.9
6,534,935	+				+0.3
6,534,935	+				-1.6
6,534,935	+				-1.9
6,534,935	+				+0.6
6,534,936	-				+0.1
6,534,936	-				+1.0
6,534,936	-				+0.2
6,534,936	-				-2.0
6,534,936	-				-0.5
6,534,936	-				-0.1
6,534,936	-				-2.0
6,534,936	-				-1.6
6,534,936	-				-0.3
6,534,936	-				-0.1
6,535,023	-				+0.6
6,535,023	-				-0.5
6,535,023	-				-0.4
6,535,023	-				+0.3
6,535,023	-				-1.0
6,535,083	+		PFLU_RS29420	0.12	+1.3
6,535,083	+		PFLU_RS29420	0.12	-1.1
6,535,115	+		PFLU_RS29420	0.14	-2.2
6,535,115	+		PFLU_RS29420	0.14	+1.3
6,535,115	+		PFLU_RS29420	0.14	-0.8
6,535,115	+		PFLU_RS29420	0.14	+1.2
6,535,116	-		PFLU_RS29420	0.14	-0.7
6,535,116	-		PFLU_RS29420	0.14	-2.7
6,535,116	-		PFLU_RS29420	0.14	+1.5
6,535,116	-		PFLU_RS29420	0.14	-0.5
6,535,250	+		PFLU_RS29420	0.23	-0.7
6,535,250	+		PFLU_RS29420	0.23	-1.5
6,535,250	+		PFLU_RS29420	0.23	-1.3
6,535,250	+		PFLU_RS29420	0.23	-0.1
6,535,250	+		PFLU_RS29420	0.23	+0.3
6,535,250	+		PFLU_RS29420	0.23	-1.1
6,535,250	+		PFLU_RS29420	0.23	-0.1
6,535,250	+		PFLU_RS29420	0.23	+1.3
6,535,250	+		PFLU_RS29420	0.23	-1.0
6,535,250	+		PFLU_RS29420	0.23	+1.3
6,535,250	+		PFLU_RS29420	0.23	+0.6
6,535,250	+		PFLU_RS29420	0.23	-1.4
6,535,250	+		PFLU_RS29420	0.23	-0.9
6,535,250	+		PFLU_RS29420	0.23	+0.1
6,535,250	+		PFLU_RS29420	0.23	+1.9
6,535,250	+		PFLU_RS29420	0.23	-0.9
6,535,250	+		PFLU_RS29420	0.23	-1.1
6,535,250	+		PFLU_RS29420	0.23	-0.3
6,535,250	+		PFLU_RS29420	0.23	-1.1
6,535,250	+		PFLU_RS29420	0.23	-0.3
6,535,250	+		PFLU_RS29420	0.23	+1.3
6,535,250	+		PFLU_RS29420	0.23	-1.3
6,535,250	+		PFLU_RS29420	0.23	-1.9
6,535,250	+		PFLU_RS29420	0.23	-0.8
6,535,250	+		PFLU_RS29420	0.23	-0.3
6,535,250	+		PFLU_RS29420	0.23	-1.3
6,535,250	+		PFLU_RS29420	0.23	+0.8
6,535,250	+		PFLU_RS29420	0.23	-2.3
6,535,250	+		PFLU_RS29420	0.23	+1.3
6,535,250	+		PFLU_RS29420	0.23	-2.1
6,535,250	+		PFLU_RS29420	0.23	+1.7
6,535,250	+		PFLU_RS29420	0.23	-1.8
6,535,250	+		PFLU_RS29420	0.23	-0.1
6,535,251	-		PFLU_RS29420	0.23	-0.5
6,535,251	-		PFLU_RS29420	0.23	-0.7
6,535,251	-		PFLU_RS29420	0.23	-0.5
6,535,251	-		PFLU_RS29420	0.23	+0.8
6,535,251	-		PFLU_RS29420	0.23	-1.4
6,535,251	-		PFLU_RS29420	0.23	-1.0
6,535,251	-		PFLU_RS29420	0.23	-1.0
6,535,251	-		PFLU_RS29420	0.23	-0.8
6,535,251	-		PFLU_RS29420	0.23	-1.7
6,535,251	-		PFLU_RS29420	0.23	-0.5
6,535,251	-		PFLU_RS29420	0.23	-0.8
6,535,251	-		PFLU_RS29420	0.23	-1.5
6,535,251	-		PFLU_RS29420	0.23	+0.7
6,535,251	-		PFLU_RS29420	0.23	+0.9
6,535,251	-		PFLU_RS29420	0.23	-1.3
6,535,251	-		PFLU_RS29420	0.23	-0.8
6,535,251	-		PFLU_RS29420	0.23	-2.3
6,535,251	-		PFLU_RS29420	0.23	-1.4
6,535,251	-		PFLU_RS29420	0.23	+0.3
6,535,251	-		PFLU_RS29420	0.23	-1.2
6,535,251	-		PFLU_RS29420	0.23	-0.1
6,535,251	-		PFLU_RS29420	0.23	+1.3
6,535,251	-		PFLU_RS29420	0.23	+0.6
6,535,251	-		PFLU_RS29420	0.23	+2.8
6,535,251	-		PFLU_RS29420	0.23	-1.0
6,535,251	-		PFLU_RS29420	0.23	-1.3
6,535,251	-		PFLU_RS29420	0.23	-1.9
6,535,251	-		PFLU_RS29420	0.23	-0.9
6,535,251	-		PFLU_RS29420	0.23	+0.0
6,535,251	-		PFLU_RS29420	0.23	-2.0
6,535,251	-		PFLU_RS29420	0.23	-0.4
6,535,251	-		PFLU_RS29420	0.23	+0.3
6,535,251	-		PFLU_RS29420	0.23	-0.1
6,535,251	-		PFLU_RS29420	0.23	-1.3
6,535,251	-		PFLU_RS29420	0.23	+0.1
6,535,251	-		PFLU_RS29420	0.23	-1.2
6,535,251	-		PFLU_RS29420	0.23	-0.5
6,535,251	-		PFLU_RS29420	0.23	-0.5
6,535,251	-		PFLU_RS29420	0.23	-0.1
6,535,251	-		PFLU_RS29420	0.23	-1.5
6,535,251	-		PFLU_RS29420	0.23	-2.8
6,535,251	-		PFLU_RS29420	0.23	+0.1
6,535,251	-		PFLU_RS29420	0.23	-0.1
6,535,251	-		PFLU_RS29420	0.23	+0.7
6,535,251	-		PFLU_RS29420	0.23	-1.0
6,535,251	-		PFLU_RS29420	0.23	-1.1
6,535,254	+		PFLU_RS29420	0.24	-0.4
6,535,254	+		PFLU_RS29420	0.24	-0.4
6,535,254	+		PFLU_RS29420	0.24	-2.4
6,535,254	+		PFLU_RS29420	0.24	+1.5
6,535,254	+		PFLU_RS29420	0.24	-2.0
6,535,254	+		PFLU_RS29420	0.24	-0.5
6,535,254	+		PFLU_RS29420	0.24	-1.5
6,535,254	+		PFLU_RS29420	0.24	-0.5
6,535,254	+		PFLU_RS29420	0.24	-1.5
6,535,255	-		PFLU_RS29420	0.24	-2.5
6,535,255	-		PFLU_RS29420	0.24	+2.9
6,535,255	-		PFLU_RS29420	0.24	-0.1
6,535,255	-		PFLU_RS29420	0.24	+0.3
6,535,255	-		PFLU_RS29420	0.24	+0.9
6,535,255	-		PFLU_RS29420	0.24	+1.7
6,535,255	-		PFLU_RS29420	0.24	-1.4
6,535,255	-		PFLU_RS29420	0.24	-1.9
6,535,328	+		PFLU_RS29420	0.29	+0.6
6,535,328	+		PFLU_RS29420	0.29	-0.4
6,535,328	+		PFLU_RS29420	0.29	+0.6
6,535,328	+		PFLU_RS29420	0.29	-1.3
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6,535,328	+		PFLU_RS29420	0.29	+0.3
6,535,328	+		PFLU_RS29420	0.29	-0.1
6,535,328	+		PFLU_RS29420	0.29	-1.0
6,535,329	-		PFLU_RS29420	0.29	-0.7
6,535,329	-		PFLU_RS29420	0.29	+2.9
6,535,329	-		PFLU_RS29420	0.29	-0.1
6,535,329	-		PFLU_RS29420	0.29	+1.1
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6,535,329	-		PFLU_RS29420	0.29	-1.3
6,535,329	-		PFLU_RS29420	0.29	+0.9
6,535,329	-		PFLU_RS29420	0.29	+1.1
6,535,329	-		PFLU_RS29420	0.29	-1.3
6,535,377	+		PFLU_RS29420	0.32	+0.1
6,535,446	+		PFLU_RS29420	0.36	-0.3
6,535,447	-		PFLU_RS29420	0.37	+3.9
6,535,447	-		PFLU_RS29420	0.37	-1.7
6,535,447	-		PFLU_RS29420	0.37	+1.2
6,535,603	+		PFLU_RS29420	0.47	+1.2
6,535,603	+		PFLU_RS29420	0.47	+1.9
6,535,603	+		PFLU_RS29420	0.47	+0.1
6,535,603	+		PFLU_RS29420	0.47	+2.0
6,535,603	+		PFLU_RS29420	0.47	-1.3
6,535,603	+		PFLU_RS29420	0.47	+0.1
6,535,603	+		PFLU_RS29420	0.47	-0.7
6,535,604	-		PFLU_RS29420	0.47	-1.4
6,535,604	-		PFLU_RS29420	0.47	-1.4
6,535,604	-		PFLU_RS29420	0.47	-1.0
6,535,604	-		PFLU_RS29420	0.47	-1.3