Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3418

Experiment: Aerobic, no iron sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic, no iron sample3
3,586,864	+		Psest_3416	0.57	-3.0
3,586,864	+		Psest_3416	0.57	-0.9
3,586,865	-		Psest_3416	0.57	-1.1
3,586,865	-		Psest_3416	0.57	-1.6
3,586,939	+		Psest_3416	0.65	-2.7
3,587,060	+		Psest_3416	0.78	-1.6
3,587,061	-		Psest_3416	0.78	-2.8
3,587,140	-		Psest_3416	0.87	-1.0
3,587,220	+				-3.0
3,587,244	+				-2.9
3,587,244	+				-1.8
3,587,245	-				-1.0
3,587,256	+				-3.1
3,587,257	-				-2.4
3,587,257	-				-1.2
3,587,257	-				-1.3
3,587,257	-				-3.2
3,587,268	+				-3.3
3,587,269	-				-1.3
3,587,269	-				-2.1
3,587,276	+				-3.5
3,587,277	-				-1.4
3,587,314	-				+0.4
3,587,331	-		Psest_3417	0.13	+1.1
3,587,331	-		Psest_3417	0.13	-0.1
3,587,331	-		Psest_3417	0.13	+0.6
3,587,371	+		Psest_3417	0.21	-2.9
3,587,372	-		Psest_3417	0.21	-0.8
3,587,372	-		Psest_3417	0.21	+1.9
3,587,387	+		Psest_3417	0.24	-2.7
3,587,388	-		Psest_3417	0.24	+0.2
3,587,388	-		Psest_3417	0.24	-0.6
3,587,422	-		Psest_3417	0.31	+0.3
3,587,424	+		Psest_3417	0.31	-2.2
3,587,424	+		Psest_3417	0.31	-2.5
3,587,425	-		Psest_3417	0.31	-0.3
3,587,425	-		Psest_3417	0.31	+0.7
3,587,425	-		Psest_3417	0.31	+0.0
3,587,436	+		Psest_3417	0.33	-0.9
3,587,436	+		Psest_3417	0.33	-2.9
3,587,436	+		Psest_3417	0.33	-1.6
3,587,437	-		Psest_3417	0.34	+0.5
3,587,437	-		Psest_3417	0.34	-1.4
3,587,445	+		Psest_3417	0.35	-2.3
3,587,445	+		Psest_3417	0.35	-1.5
3,587,445	+		Psest_3417	0.35	-2.9
3,587,446	-		Psest_3417	0.35	+0.7
3,587,446	-		Psest_3417	0.35	-0.4
3,587,446	-		Psest_3417	0.35	-0.5
3,587,446	-		Psest_3417	0.35	+0.6
3,587,446	-		Psest_3417	0.35	-0.5
3,587,486	+		Psest_3417	0.43	-3.3
3,587,486	+		Psest_3417	0.43	-3.3
3,587,486	+		Psest_3417	0.43	-1.9
3,587,487	-		Psest_3417	0.43	-0.0
3,587,487	-		Psest_3417	0.43	-0.3
3,587,487	-		Psest_3417	0.43	-0.4
3,587,487	-		Psest_3417	0.43	-0.3
3,587,487	-		Psest_3417	0.43	+0.1
3,587,539	-		Psest_3417	0.53	+1.3
3,587,583	+		Psest_3417	0.62	-1.3
3,587,611	+		Psest_3417	0.67	-3.0
3,587,611	+		Psest_3417	0.67	-3.7
3,587,624	+		Psest_3417	0.70	-3.9
3,587,624	+		Psest_3417	0.70	+0.1
3,587,624	+		Psest_3417	0.70	-2.5
3,587,624	+		Psest_3417	0.70	-0.7
3,587,625	-		Psest_3417	0.70	-0.5
3,587,625	-		Psest_3417	0.70	-0.1
3,587,670	+		Psest_3417	0.79	-3.6
3,587,671	-		Psest_3417	0.79	-0.2
3,587,671	-		Psest_3417	0.79	-1.0
3,587,671	-		Psest_3417	0.79	-0.6
3,587,690	-		Psest_3417	0.83	-0.6
3,587,767	+				-2.6
3,587,768	-				-1.2
3,587,768	-				-0.9
3,587,769	+				-3.1
3,587,769	+				-3.7
3,587,769	+				-1.7
3,587,769	+				+1.0
3,587,769	+				-1.6
3,587,769	+				+0.7
3,587,769	+				-3.8
3,587,786	-				-0.7
3,587,824	+				-1.6
3,587,854	+				-2.6
3,587,925	-		Psest_3418	0.14	+0.6
3,587,926	+		Psest_3418	0.14	-2.6
3,587,926	+		Psest_3418	0.14	-1.6
3,587,927	-		Psest_3418	0.14	+0.4
3,587,927	-		Psest_3418	0.14	+0.3
3,587,927	-		Psest_3418	0.14	+0.1
3,587,927	-		Psest_3418	0.14	+0.9
3,587,927	-		Psest_3418	0.14	-0.4
3,587,927	-		Psest_3418	0.14	-0.3
3,587,927	-		Psest_3418	0.14	-0.5
3,587,927	-		Psest_3418	0.14	-0.1
3,588,010	+		Psest_3418	0.23	-3.6
3,588,010	+		Psest_3418	0.23	-1.0
3,588,011	-		Psest_3418	0.23	+0.3
3,588,011	-		Psest_3418	0.23	-0.2
3,588,011	-		Psest_3418	0.23	-0.5
3,588,011	-		Psest_3418	0.23	-0.9
3,588,058	+		Psest_3418	0.28	-2.0
3,588,058	+		Psest_3418	0.28	-1.6
3,588,059	-		Psest_3418	0.28	-0.5
3,588,059	-		Psest_3418	0.28	-0.6
3,588,059	-		Psest_3418	0.28	-0.2
3,588,059	-		Psest_3418	0.28	-0.2
3,588,062	+		Psest_3418	0.28	-2.9
3,588,062	+		Psest_3418	0.28	-2.3
3,588,062	+		Psest_3418	0.28	-2.7
3,588,184	-		Psest_3418	0.41	-0.4
3,588,196	+		Psest_3418	0.42	-0.6
3,588,196	+		Psest_3418	0.42	-3.5
3,588,197	-		Psest_3418	0.42	-0.3
3,588,197	-		Psest_3418	0.42	+0.7
3,588,197	-		Psest_3418	0.42	+0.7
3,588,197	-		Psest_3418	0.42	-0.6
3,588,197	-		Psest_3418	0.42	+0.3
3,588,288	+		Psest_3418	0.52	-2.4
3,588,347	-		Psest_3418	0.58	-1.6
3,588,347	-		Psest_3418	0.58	-1.0
3,588,407	-		Psest_3418	0.64	-0.9
3,588,473	-		Psest_3418	0.71	-0.3
3,588,520	+		Psest_3418	0.76	-0.3
3,588,520	+		Psest_3418	0.76	-1.4
3,588,520	+		Psest_3418	0.76	-3.4
3,588,520	+		Psest_3418	0.76	-1.7
3,588,520	+		Psest_3418	0.76	-1.7
3,588,521	-		Psest_3418	0.76	-1.1
3,588,521	-		Psest_3418	0.76	-0.6
3,588,521	-		Psest_3418	0.76	-0.4
3,588,521	-		Psest_3418	0.76	-0.8
3,588,521	-		Psest_3418	0.76	-1.0
3,588,521	-		Psest_3418	0.76	-0.7
3,588,521	-		Psest_3418	0.76	-1.6
3,588,626	-		Psest_3418	0.87	-1.0
3,588,720	+				-4.1
3,588,720	+				-2.1
3,588,721	-				-0.8
3,588,721	-				-0.1
3,588,779	+				-1.7
3,588,807	+				-1.5
3,588,886	+				-1.7
3,588,887	-				-1.1
3,588,916	+				-0.9
3,589,037	+		Psest_3419	0.30	+0.5
3,589,037	+		Psest_3419	0.30	+0.7
3,589,037	+		Psest_3419	0.30	+0.7
3,589,037	+		Psest_3419	0.30	-0.7
3,589,037	+		Psest_3419	0.30	-1.2
3,589,037	+		Psest_3419	0.30	-0.1
3,589,037	+		Psest_3419	0.30	+1.7
3,589,037	+		Psest_3419	0.30	-0.9
3,589,037	+		Psest_3419	0.30	-1.1
3,589,038	-		Psest_3419	0.30	-0.6
3,589,038	-		Psest_3419	0.30	+0.9
3,589,038	-		Psest_3419	0.30	+0.3
3,589,038	-		Psest_3419	0.30	+0.9
3,589,038	-		Psest_3419	0.30	+0.7
3,589,038	-		Psest_3419	0.30	+0.4
3,589,038	-		Psest_3419	0.30	-1.3
3,589,041	+		Psest_3419	0.31	-0.2
3,589,041	+		Psest_3419	0.31	+0.2
3,589,041	+		Psest_3419	0.31	+0.8
3,589,041	+		Psest_3419	0.31	+1.0
3,589,041	+		Psest_3419	0.31	+0.7
3,589,042	-		Psest_3419	0.31	+0.4
3,589,042	-		Psest_3419	0.31	+1.7
3,589,042	-		Psest_3419	0.31	-1.1
3,589,042	-		Psest_3419	0.31	+1.7
3,589,128	-		Psest_3419	0.58	-0.5
3,589,128	-		Psest_3419	0.58	+0.7
3,589,194	-		Psest_3419	0.78	-0.1
3,589,228	+		Psest_3419	0.89	-0.2
3,589,228	+		Psest_3419	0.89	+0.2
3,589,229	-		Psest_3419	0.89	-0.4
3,589,229	-		Psest_3419	0.89	+0.8
3,589,239	+				+0.6
3,589,239	+				+0.1
3,589,239	+				-0.9
3,589,239	+				+0.8
3,589,239	+				-1.4
3,589,240	-				+1.7
3,589,240	-				-0.3
3,589,240	-				+0.7
3,589,240	-				-1.1
3,589,243	+				-2.0
3,589,243	+				+0.1
3,589,243	+				-0.5
3,589,243	+				+0.7
3,589,244	-				-0.6
3,589,262	+				+0.7
3,589,263	-				-0.7
3,589,263	-				-1.4
3,589,284	-				-0.5
3,589,375	-		Psest_3420	0.12	-0.7
3,589,407	+		Psest_3420	0.16	-1.7
3,589,407	+		Psest_3420	0.16	-0.4
3,589,408	-		Psest_3420	0.16	+0.2
3,589,408	-		Psest_3420	0.16	-1.1
3,589,434	-		Psest_3420	0.19	-0.2
3,589,505	+		Psest_3420	0.27	-1.2
3,589,505	+		Psest_3420	0.27	-0.7
3,589,506	-		Psest_3420	0.27	-1.6
3,589,506	-		Psest_3420	0.27	-2.3
3,589,506	-		Psest_3420	0.27	-1.6
3,589,506	-		Psest_3420	0.27	-2.2
3,589,506	-		Psest_3420	0.27	-0.3
3,589,507	+		Psest_3420	0.27	-1.8
3,589,507	+		Psest_3420	0.27	-1.1
3,589,507	+		Psest_3420	0.27	-2.2
3,589,507	+		Psest_3420	0.27	-2.2
3,589,508	-		Psest_3420	0.27	-2.3
3,589,508	-		Psest_3420	0.27	-1.0
3,589,508	-		Psest_3420	0.27	-1.4
3,589,508	-		Psest_3420	0.27	-1.9
3,589,508	-		Psest_3420	0.27	-0.9
3,589,508	-		Psest_3420	0.27	-0.1
3,589,508	-		Psest_3420	0.27	-0.6
3,589,537	-		Psest_3420	0.30	-3.5
3,589,570	+		Psest_3420	0.34	-1.6
3,589,570	+		Psest_3420	0.34	-1.8
3,589,570	+		Psest_3420	0.34	-2.1
3,589,570	+		Psest_3420	0.34	-2.8
3,589,570	+		Psest_3420	0.34	-2.3
3,589,571	-		Psest_3420	0.34	-0.9
3,589,571	-		Psest_3420	0.34	-1.0
3,589,571	-		Psest_3420	0.34	-1.6
3,589,571	-		Psest_3420	0.34	-0.1
3,589,571	-		Psest_3420	0.34	-1.6
3,589,664	+		Psest_3420	0.45	-1.1
3,589,664	+		Psest_3420	0.45	+0.7
3,589,665	-		Psest_3420	0.45	-2.9
3,589,665	-		Psest_3420	0.45	-1.9
3,589,736	+		Psest_3420	0.53	-1.6
3,589,736	+		Psest_3420	0.53	-1.8
3,589,737	-		Psest_3420	0.53	-0.8
3,589,737	-		Psest_3420	0.53	-1.9
3,589,737	-		Psest_3420	0.53	-0.6
3,589,737	-		Psest_3420	0.53	-2.2