Experiment: Aerobic, no iron sample1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2466 and Psest_2467 overlap by 4 nucleotides Psest_2467 and Psest_2468 are separated by 40 nucleotides Psest_2468 and Psest_2469 are separated by 69 nucleotides Psest_2469 and Psest_2470 overlap by 4 nucleotides Psest_2470 and Psest_2471 are separated by 22 nucleotides
Psest_2466: Psest_2466 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,637,305 to 2,638,162
_2466
Psest_2467: Psest_2467 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,638,159 to 2,639,058
_2467
Psest_2468: Psest_2468 - uncharacterized domain 1, at 2,639,099 to 2,639,542
_2468
Psest_2469: Psest_2469 - phosphohistidine phosphatase SixA, at 2,639,612 to 2,640,070
_2469
Psest_2470: Psest_2470 - hypothetical protein, at 2,640,067 to 2,640,423
_2470
Psest_2471: Psest_2471 - Glycerol-3-phosphate dehydrogenase, at 2,640,446 to 2,641,468
_2471
Position (kb)
2639
2640 Strain fitness (log2 ratio)
-2
-1
0
1 at 2638.177 kb on - strand at 2638.310 kb on + strand, within Psest_2467 at 2638.310 kb on + strand, within Psest_2467 at 2638.311 kb on - strand, within Psest_2467 at 2638.416 kb on - strand, within Psest_2467 at 2638.488 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.645 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.920 kb on - strand, within Psest_2467 at 2638.959 kb on + strand, within Psest_2467 at 2638.959 kb on + strand, within Psest_2467 at 2638.960 kb on - strand, within Psest_2467 at 2639.080 kb on + strand at 2639.081 kb on - strand at 2639.081 kb on - strand at 2639.301 kb on + strand, within Psest_2468 at 2639.301 kb on + strand, within Psest_2468 at 2639.328 kb on + strand, within Psest_2468 at 2639.329 kb on - strand, within Psest_2468 at 2639.329 kb on - strand, within Psest_2468 at 2639.329 kb on - strand, within Psest_2468 at 2639.392 kb on - strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.462 kb on + strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.463 kb on - strand, within Psest_2468 at 2639.465 kb on - strand, within Psest_2468 at 2639.549 kb on + strand at 2639.563 kb on - strand at 2639.928 kb on - strand, within Psest_2469 at 2640.062 kb on + strand at 2640.063 kb on - strand at 2640.195 kb on + strand, within Psest_2470 at 2640.231 kb on - strand, within Psest_2470 at 2640.231 kb on - strand, within Psest_2470 at 2640.412 kb on - strand at 2640.436 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aerobic, no iron sample1 remove 2,638,177 - -0.9 2,638,310 + Psest_2467 0.17 -0.9 2,638,310 + Psest_2467 0.17 -0.6 2,638,311 - Psest_2467 0.17 +0.9 2,638,416 - Psest_2467 0.29 -0.9 2,638,488 + Psest_2467 0.37 +0.1 2,638,490 + Psest_2467 0.37 -0.3 2,638,490 + Psest_2467 0.37 -0.1 2,638,490 + Psest_2467 0.37 -0.2 2,638,491 - Psest_2467 0.37 +0.1 2,638,491 - Psest_2467 0.37 -0.6 2,638,491 - Psest_2467 0.37 -0.3 2,638,491 - Psest_2467 0.37 -0.2 2,638,645 + Psest_2467 0.54 -0.4 2,638,703 + Psest_2467 0.60 -0.3 2,638,703 + Psest_2467 0.60 -0.0 2,638,703 + Psest_2467 0.60 -0.0 2,638,703 + Psest_2467 0.60 +0.3 2,638,703 + Psest_2467 0.60 -0.0 2,638,703 + Psest_2467 0.60 -0.1 2,638,703 + Psest_2467 0.60 +0.2 2,638,703 + Psest_2467 0.60 -0.5 2,638,704 - Psest_2467 0.61 +0.5 2,638,704 - Psest_2467 0.61 -0.3 2,638,704 - Psest_2467 0.61 +0.3 2,638,704 - Psest_2467 0.61 +0.2 2,638,920 - Psest_2467 0.85 +0.6 2,638,959 + Psest_2467 0.89 +0.4 2,638,959 + Psest_2467 0.89 +0.1 2,638,960 - Psest_2467 0.89 -0.1 2,639,080 + +0.7 2,639,081 - +0.2 2,639,081 - -0.5 2,639,301 + Psest_2468 0.45 -0.8 2,639,301 + Psest_2468 0.45 -0.6 2,639,328 + Psest_2468 0.52 -0.1 2,639,329 - Psest_2468 0.52 -0.5 2,639,329 - Psest_2468 0.52 -0.7 2,639,329 - Psest_2468 0.52 -0.6 2,639,392 - Psest_2468 0.66 +0.1 2,639,462 + Psest_2468 0.82 -0.3 2,639,462 + Psest_2468 0.82 +0.3 2,639,462 + Psest_2468 0.82 -0.5 2,639,462 + Psest_2468 0.82 -0.9 2,639,462 + Psest_2468 0.82 -1.2 2,639,462 + Psest_2468 0.82 -2.3 2,639,462 + Psest_2468 0.82 +0.3 2,639,463 - Psest_2468 0.82 -0.4 2,639,463 - Psest_2468 0.82 -2.1 2,639,463 - Psest_2468 0.82 -0.2 2,639,463 - Psest_2468 0.82 +1.6 2,639,463 - Psest_2468 0.82 -0.0 2,639,463 - Psest_2468 0.82 -0.4 2,639,465 - Psest_2468 0.82 -0.7 2,639,549 + -0.5 2,639,563 - -0.5 2,639,928 - Psest_2469 0.69 -1.2 2,640,062 + -1.9 2,640,063 - -0.7 2,640,195 + Psest_2470 0.36 -0.9 2,640,231 - Psest_2470 0.46 -0.5 2,640,231 - Psest_2470 0.46 +0.6 2,640,412 - -1.3 2,640,436 + -0.6
Or see this region's nucleotide sequence