Experiment: Aerobic, with iron sample3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2410 and Psest_2411 are separated by 207 nucleotides Psest_2411 and Psest_2412 are separated by 43 nucleotides
Psest_2410: Psest_2410 - Superfamily I DNA and RNA helicases, at 2,565,949 to 2,567,919
_2410
Psest_2411: Psest_2411 - PAS domain S-box, at 2,568,127 to 2,571,120
_2411
Psest_2412: Psest_2412 - Predicted phosphatase, at 2,571,164 to 2,573,125
_2412
Position (kb)
2568
2569
2570
2571
2572 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2567.141 kb on + strand, within Psest_2410 at 2567.153 kb on + strand, within Psest_2410 at 2567.154 kb on - strand, within Psest_2410 at 2567.663 kb on + strand, within Psest_2410 at 2567.663 kb on + strand, within Psest_2410 at 2567.663 kb on + strand, within Psest_2410 at 2567.664 kb on - strand, within Psest_2410 at 2567.664 kb on - strand, within Psest_2410 at 2567.853 kb on + strand at 2567.854 kb on - strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.343 kb on + strand at 2568.343 kb on + strand at 2568.343 kb on + strand at 2568.343 kb on + strand at 2568.742 kb on + strand, within Psest_2411 at 2568.743 kb on - strand, within Psest_2411 at 2568.995 kb on - strand, within Psest_2411 at 2569.165 kb on + strand, within Psest_2411 at 2569.166 kb on - strand, within Psest_2411 at 2569.290 kb on - strand, within Psest_2411 at 2569.400 kb on + strand, within Psest_2411 at 2569.400 kb on + strand, within Psest_2411 at 2569.513 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.693 kb on + strand, within Psest_2411 at 2569.856 kb on + strand, within Psest_2411 at 2569.856 kb on + strand, within Psest_2411 at 2569.857 kb on - strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2571.307 kb on + strand at 2571.336 kb on - strand at 2571.351 kb on - strand at 2571.351 kb on - strand at 2571.723 kb on + strand, within Psest_2412 at 2571.723 kb on + strand, within Psest_2412 at 2571.723 kb on + strand, within Psest_2412 at 2571.723 kb on + strand, within Psest_2412 at 2571.724 kb on - strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.999 kb on + strand, within Psest_2412 at 2572.000 kb on - strand, within Psest_2412 at 2572.000 kb on - strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.032 kb on + strand, within Psest_2412 at 2572.033 kb on - strand, within Psest_2412 at 2572.033 kb on - strand, within Psest_2412
Per-strain Table
Position Strand Gene LocusTag Fraction Aerobic, with iron sample3 remove 2,567,141 + Psest_2410 0.60 +0.7 2,567,153 + Psest_2410 0.61 -0.8 2,567,154 - Psest_2410 0.61 +0.1 2,567,663 + Psest_2410 0.87 +1.6 2,567,663 + Psest_2410 0.87 +1.1 2,567,663 + Psest_2410 0.87 +0.3 2,567,664 - Psest_2410 0.87 -1.1 2,567,664 - Psest_2410 0.87 -1.3 2,567,853 + +0.4 2,567,854 - +0.6 2,568,170 + -1.1 2,568,170 + -0.9 2,568,170 + +0.4 2,568,170 + -0.9 2,568,170 + -0.4 2,568,170 + -1.6 2,568,170 + -0.2 2,568,170 + -1.0 2,568,170 + -2.6 2,568,171 - -1.3 2,568,171 - -0.9 2,568,171 - -2.3 2,568,171 - -1.5 2,568,171 - +0.8 2,568,171 - -0.5 2,568,171 - -0.5 2,568,171 - -0.2 2,568,171 - -0.4 2,568,171 - -0.2 2,568,171 - -1.1 2,568,171 - -0.4 2,568,171 - -0.5 2,568,171 - +0.8 2,568,171 - -0.9 2,568,171 - -0.1 2,568,171 - -0.6 2,568,171 - -0.6 2,568,343 + -1.1 2,568,343 + -0.1 2,568,343 + -1.1 2,568,343 + -1.2 2,568,742 + Psest_2411 0.21 -0.2 2,568,743 - Psest_2411 0.21 -0.7 2,568,995 - Psest_2411 0.29 -2.0 2,569,165 + Psest_2411 0.35 -0.8 2,569,166 - Psest_2411 0.35 -0.5 2,569,290 - Psest_2411 0.39 -0.8 2,569,400 + Psest_2411 0.43 +0.1 2,569,400 + Psest_2411 0.43 +0.4 2,569,513 - Psest_2411 0.46 -0.4 2,569,658 - Psest_2411 0.51 -1.1 2,569,658 - Psest_2411 0.51 -1.0 2,569,658 - Psest_2411 0.51 +0.3 2,569,658 - Psest_2411 0.51 +0.1 2,569,693 + Psest_2411 0.52 -2.7 2,569,856 + Psest_2411 0.58 -0.8 2,569,856 + Psest_2411 0.58 -1.5 2,569,857 - Psest_2411 0.58 -1.3 2,570,291 + Psest_2411 0.72 -1.6 2,570,291 + Psest_2411 0.72 -0.7 2,570,291 + Psest_2411 0.72 -0.1 2,570,291 + Psest_2411 0.72 -0.2 2,570,291 + Psest_2411 0.72 -0.2 2,571,307 + +0.9 2,571,336 - -0.3 2,571,351 - -1.8 2,571,351 - -0.4 2,571,723 + Psest_2412 0.28 +0.5 2,571,723 + Psest_2412 0.28 +0.4 2,571,723 + Psest_2412 0.28 -0.0 2,571,723 + Psest_2412 0.28 -0.6 2,571,724 - Psest_2412 0.29 +0.4 2,571,921 + Psest_2412 0.39 +0.8 2,571,921 + Psest_2412 0.39 -0.0 2,571,921 + Psest_2412 0.39 -0.4 2,571,921 + Psest_2412 0.39 -0.2 2,571,921 + Psest_2412 0.39 +1.6 2,571,921 + Psest_2412 0.39 +0.3 2,571,922 - Psest_2412 0.39 -0.8 2,571,922 - Psest_2412 0.39 -0.2 2,571,922 - Psest_2412 0.39 +1.4 2,571,922 - Psest_2412 0.39 +0.9 2,571,922 - Psest_2412 0.39 -1.2 2,571,922 - Psest_2412 0.39 +0.8 2,571,922 - Psest_2412 0.39 +0.3 2,571,922 - Psest_2412 0.39 +0.8 2,571,999 + Psest_2412 0.43 -0.1 2,572,000 - Psest_2412 0.43 -0.6 2,572,000 - Psest_2412 0.43 -0.3 2,572,005 + Psest_2412 0.43 +1.8 2,572,005 + Psest_2412 0.43 -0.5 2,572,005 + Psest_2412 0.43 +0.5 2,572,005 + Psest_2412 0.43 -1.7 2,572,005 + Psest_2412 0.43 -0.0 2,572,006 - Psest_2412 0.43 -0.7 2,572,006 - Psest_2412 0.43 +0.2 2,572,006 - Psest_2412 0.43 +0.7 2,572,006 - Psest_2412 0.43 -0.4 2,572,006 - Psest_2412 0.43 +0.7 2,572,006 - Psest_2412 0.43 -1.3 2,572,006 - Psest_2412 0.43 -0.4 2,572,032 + Psest_2412 0.44 -0.1 2,572,033 - Psest_2412 0.44 +0.3 2,572,033 - Psest_2412 0.44 +0.1
Or see this region's nucleotide sequence